RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 SPASTQ9UBP0 616 aa12.21□□□□□ -0.45
PDLIM7-214ENST00000505746 UBA2Q9UBT2 640 aaPredicted RBP12.21□□□□□ -0.45
PDLIM7-214ENST00000505746 GGT7Q9UJ14 662 aa12.21□□□□□ -0.45
PDLIM7-214ENST00000505746 FAM208BQ5VWN6 2430 aa12.21□□□□□ -0.46
PDLIM7-214ENST00000505746 EIF3CLB5ME19 914 aaKnown RBP12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 SPINT1O43278 529 aa12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 TLX3O43711 291 aaPredicted RBP12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 BRINP1O60477 761 aa12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 TIMP2P16035 220 aa12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 ELP6Q0PNE2 266 aa12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 EIF2B5Q13144 721 aaKnown RBP12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 CYTH1Q15438 398 aa12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 KLHL40Q2TBA0 621 aa12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 CDCP2Q5VXM1 449 aa12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 IRF2BP2Q7Z5L9 587 aa12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 DNAAF5Q86Y56 855 aa12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 LSMEM2Q8N112 164 aa12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 AOPEPQ8N6M6 819 aa12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 IFI44Q8TCB0 444 aa12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 MAPK15Q8TD08 544 aa12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 LMX1AQ8TE12 382 aa12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 TBATAQ96M53 351 aa12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 ZNF641Q96N77 438 aaPredicted RBP12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 EIF3CQ99613 913 aaKnown RBP12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 SLC13A1Q9BZW2 595 aa12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 KLC2Q9H0B6 622 aa12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 HSD3B7Q9H2F3 369 aa12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 CAAP1Q9H8G2 361 aa12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 KLF15Q9UIH9 416 aa12.2□□□□□ -0.46
PDLIM7-214ENST00000505746 LY6G6EA0A0G2JKS1 128 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 EIF4E1BA6NMX2 242 aaKnown RBP12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 TMEM110-MUSTN1A8MSY1 372 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 SMTNL1A8MU46 457 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 INSIG1O15503 277 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 DAPK3O43293 454 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 MYF5P13349 255 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 ATP1A3P13637 1013 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 PSMA2P25787 234 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 ITPKBP27987 946 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 IGFALSP35858 605 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 EIF4A3P38919 411 aaKnown RBP12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 RPIAP49247 311 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 TYRO3Q06418 890 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 MAMLD1Q13495 774 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 ACAP1Q15027 740 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 NR0B2Q15466 257 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 TBC1D25Q3MII6 688 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 TMEM52BQ4KMG9 183 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 FILIP1LQ4L180 1135 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 PRRT3Q5FWE3 981 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 LRRC73Q5JTD7 316 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 TPRG1LQ5T0D9 272 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 CFAP58Q5T655 872 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 FAXCQ5TGI0 409 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 ERAP2Q6P179 960 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 PHACTR4Q8IZ21 702 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 TP53I13Q8NBR0 393 aaPredicted RBP12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 NETO2Q8NC67 525 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 TPCN2Q8NHX9 752 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 WRAP53Q9BUR4 548 aaKnown RBP12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 SUV39H2Q9H5I1 410 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 DHX35Q9H5Z1 703 aaKnown RBP12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 LRRC19Q9H756 370 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 MBNL1Q9NR56 388 aaKnown RBP12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 LHX3Q9UBR4 397 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 APOBEC3BQ9UH17 382 aaKnown RBP12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 AP4E1Q9UPM8 1137 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 U3KQA8 63 aa12.19□□□□□ -0.46
PDLIM7-214ENST00000505746 CPED1A4D0V7 1026 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 EME2A4GXA9 379 aaPredicted RBP12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 ARHGAP42A6NI28 874 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 TMCO5BA8MYB1 307 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 J3KR12 359 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 EEF2KO00418 725 aaKnown RBP12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 PRAMEF11O60813 436 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 USP12O75317 370 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 CSO75390 466 aaKnown RBP12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 RNF8O76064 485 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 PIGNO95427 931 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 ANXA6P08133 673 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 ITIH2P19823 946 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 HTR1BP28222 390 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 CSNK1DP48730 415 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 PEX5P50542 639 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 BLKP51451 505 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 ADKP55263 362 aaKnown RBP12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 OGDHQ02218 1023 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 PPARDQ03181 441 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 LRRC14Q15048 493 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 ASIC2Q16515 512 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 CDKN3Q16667 212 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 UGP2Q16851 508 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 DEFB133Q30KQ1 61 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 ERMARDQ5T6L9 678 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 PLEKHA7Q6IQ23 1121 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 BRAT1Q6PJG6 821 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 MACC1Q6ZN28 852 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 EFL1Q7Z2Z2 1120 aaKnown RBP12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 GRAMD1AQ96CP6 724 aa12.18□□□□□ -0.46
PDLIM7-214ENST00000505746 EXOC2Q96KP1 924 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms