RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 NEMP1O14524 444 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 CSF2P04141 144 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 CYP1A1P04798 512 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 ADRB3P13945 408 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 CR2P20023 1033 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 MMP8P22894 467 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 SLC5A2P31639 672 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 ADRA1BP35368 520 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 ACVRL1P37023 503 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 RPIAP49247 311 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 SERINC3Q13530 473 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 SPIDRQ14159 915 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 POLD3Q15054 466 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 CCDC14Q49A88 953 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 CDKAL1Q5VV42 579 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 SASS6Q6UVJ0 657 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 LEKR1Q6ZMV7 388 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 BNIPLQ7Z465 357 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 JAMLQ86YT9 394 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 ZSCAN1Q8NBB4 408 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 NEK11Q8NG66 645 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 FAM172AQ8WUF8 416 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 GLMNQ92990 594 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 TBC1D31Q96DN5 1066 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 IL12RB2Q99665 862 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 SLC25A18Q9H1K4 315 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 LMBRD1Q9NUN5 540 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 FANCLQ9NW38 375 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 ADAM22Q9P0K1 906 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 HECAQ9UBI9 543 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 ZFR2Q9UPR6 939 aaKnown RBP16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 WASF2Q9Y6W5 498 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 FLNCQ14315 2725 aa16.26■□□□□ 0.19
PDLIM7-213ENST00000505074 TPP1O14773 563 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 PLD2O14939 933 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 MUSKO15146 869 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 EPHB6O15197 1021 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 AQP9O43315 295 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 NOBOXO60393 691 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 ZMPSTE24O75844 475 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 KRT3P12035 628 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 NME1P15531 152 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 RHOQP17081 205 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 CHRNB2P17787 502 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 ITGB7P26010 798 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 L1CAMP32004 1257 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 MAPKAPK2P49137 400 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 GEMIN4P57678 1058 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 RPS21P63220 83 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 TGIF1Q15583 401 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 DEFB133Q30KQ1 61 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 PERM1Q5SV97 790 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 KIAA1161Q6NSJ0 714 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 PARS2Q7L3T8 475 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 FBXO39Q8N4B4 442 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 NAT6Q93015 286 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 LIN37Q96GY3 246 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 FEM1CQ96JP0 617 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 SLC17A9Q9BYT1 436 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 SYNDIG1Q9H7V2 258 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 NDFIP2Q9NV92 336 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 SEPT10Q9P0V9 454 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 ZNF212Q9UDV6 495 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 IPO11Q9UI26 975 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 HS3ST3A1Q9Y663 406 aa16.25■□□□□ 0.19
PDLIM7-213ENST00000505074 TLN1Q9Y490 2541 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 SCN8AQ9UQD0 1980 aa16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 ANKRD62A6NC57 917 aa16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 C2CD4BA6NLJ0 364 aa16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 KRIT1O00522 736 aa16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 RAMP2O60895 175 aa16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 ZNF821O75541 412 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 PAK4O96013 591 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 PLEKP08567 350 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 LIPCP11150 499 aa16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 CDK11BP21127 795 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 GPD1P21695 349 aa16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 GKP32189 559 aa16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 COPB1P53618 953 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 JAM2P57087 298 aa16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 SRSF6Q13247 344 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 SGCGQ13326 291 aa16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 EIF3IQ13347 325 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 FZD2Q14332 565 aa16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 TBR1Q16650 682 aa16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 C4orf17Q53FE4 359 aa16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 SCYL2Q6P3W7 929 aa16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 STRADAQ7RTN6 431 aa16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 PARGQ86W56 976 aa16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 CCDC185Q8N715 623 aa16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 LMX1AQ8TE12 382 aa16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 ACSL6Q9UKU0 697 aa16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 DAAM1Q9Y4D1 1078 aa16.24■□□□□ 0.19
PDLIM7-213ENST00000505074 SPTY2D1-AS1A0A0U1RR47 76 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 FAM72CH0Y354 149 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 LRIG2O94898 1065 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 CALB1P05937 261 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 PTPN9P43378 593 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 PDX1P52945 283 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 SNRPD1P62314 119 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms