RNA–Protein interactions for RNA: ENST00000504872.5

APBB3-209, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 4

Gene APBB3, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-209	ENST00000504872	MARC1	Q5VT66	337 aa		10.85	□□□□□ -0.67
APBB3-209	ENST00000504872	AGBL4	Q5VU57	503 aa		10.85	□□□□□ -0.67
APBB3-209	ENST00000504872	PEAR1	Q5VY43	1037 aa	Predicted RBP	10.85	□□□□□ -0.67
APBB3-209	ENST00000504872	AADACL2	Q6P093	401 aa		10.85	□□□□□ -0.67
APBB3-209	ENST00000504872	KIAA1324	Q6UXG2	1013 aa	Known RBP	10.85	□□□□□ -0.67
APBB3-209	ENST00000504872	SRL	Q86TD4	932 aa		10.85	□□□□□ -0.67
APBB3-209	ENST00000504872	HDDC3	Q8N4P3	179 aa		10.85	□□□□□ -0.67
APBB3-209	ENST00000504872	TRIM58	Q8NG06	486 aa		10.85	□□□□□ -0.67
APBB3-209	ENST00000504872	ECHDC3	Q96DC8	303 aa		10.85	□□□□□ -0.67
APBB3-209	ENST00000504872	LGMN	Q99538	433 aa		10.85	□□□□□ -0.67
APBB3-209	ENST00000504872	ORAI3	Q9BRQ5	295 aa		10.85	□□□□□ -0.67
APBB3-209	ENST00000504872	OSBPL8	Q9BZF1	889 aa		10.85	□□□□□ -0.67
APBB3-209	ENST00000504872	TM6SF2	Q9BZW4	377 aa		10.85	□□□□□ -0.67
APBB3-209	ENST00000504872	LZTFL1	Q9NQ48	299 aa		10.85	□□□□□ -0.67
APBB3-209	ENST00000504872	KCND1	Q9NSA2	647 aa		10.85	□□□□□ -0.67
APBB3-209	ENST00000504872	DKK3	Q9UBP4	350 aa		10.85	□□□□□ -0.67
APBB3-209	ENST00000504872	SEPT3	Q9UH03	358 aa		10.85	□□□□□ -0.67
APBB3-209	ENST00000504872	EVL	Q9UI08	416 aa	Predicted RBP	10.85	□□□□□ -0.67
APBB3-209	ENST00000504872	KLK13	Q9UKR3	277 aa		10.85	□□□□□ -0.67
APBB3-209	ENST00000504872	PACSIN2	Q9UNF0	486 aa	Predicted RBP	10.85	□□□□□ -0.67
APBB3-209	ENST00000504872	ATP8A1	Q9Y2Q0	1164 aa		10.85	□□□□□ -0.67
APBB3-209	ENST00000504872	LAMA1	P25391	3075 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872		A0A1W2PP55	124 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	TSPAN11	A1L157	253 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	BCLAF3	A2AJT9	711 aa	Known RBP	10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	APOC4-APOC2	K7ER74	178 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	AREL1	O15033	823 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	INSIG1	O15503	277 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	SLC7A4	O43246	635 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	PLRG1	O43660	514 aa	Known RBP	10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	HYAL3	O43820	417 aa	Predicted RBP	10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	RHOBTB1	O94844	696 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	MAP3K6	O95382	1288 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	APOC2	P02655	101 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	CCNB1	P14635	433 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	TIMP2	P16035	220 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	PECAM1	P16284	738 aa	Predicted RBP	10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	CES1	P23141	567 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	HSPA9	P38646	679 aa	Known RBP	10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	PTGER3	P43115	390 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	RECQL	P46063	649 aa	Predicted RBP	10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	DNA2	P51530	1060 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	RHOA	P61586	193 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	IFI35	P80217	286 aa	Predicted RBP	10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	CCDC173	Q0VFZ6	552 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	XRCC4	Q13426	336 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	GRM3	Q14832	879 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	PDK1	Q15118	436 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	PRKD1	Q15139	912 aa	Predicted RBP	10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	ZNF805	Q5CZA5	627 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	RALGPS1	Q5JS13	557 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	ZFYVE27	Q5T4F4	411 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	PIP5KL1	Q5T9C9	394 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	NCEH1	Q6PIU2	408 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	CEP68	Q76N32	757 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	BZW1	Q7L1Q6	419 aa	Known RBP	10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	ZNF354C	Q86Y25	554 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	RFX6	Q8HWS3	928 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	TMEFF1	Q8IYR6	380 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	CBARP	Q8N350	705 aa	Predicted RBP	10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	UBL4B	Q8N7F7	174 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	ARRDC2	Q8TBH0	407 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	HNRNPLL	Q8WVV9	542 aa	Known RBP	10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	TADA1	Q96BN2	335 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	GDAP1L1	Q96MZ0	367 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	ZNF641	Q96N77	438 aa	Predicted RBP	10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	NUDCD1	Q96RS6	583 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	TUBGCP5	Q96RT8	1024 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	MGME1	Q9BQP7	344 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	HEMGN	Q9BXL5	484 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	BTBD1	Q9H0C5	482 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	SMOC1	Q9H4F8	434 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	SUV39H2	Q9H5I1	410 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	EBF2	Q9HAK2	575 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	SP110	Q9HB58	689 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	NCKAP1	Q9Y2A7	1128 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	PPIL1	Q9Y3C6	166 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	HEY1	Q9Y5J3	304 aa		10.84	□□□□□ -0.67
APBB3-209	ENST00000504872	SPTAN1	Q13813	2472 aa	Known RBP	10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	C16orf96	A6NNT2	1141 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	C1QTNF3-AMACR	E9PGA6	284 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	PYCARD-AS1	I3L0S3	204 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	PLK4	O00444	970 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	KRIT1	O00522	736 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	SPINT1	O43278	529 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	HTRA2	O43464	458 aa	Predicted RBP	10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	LAT	O43561	262 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	AP1G1	O43747	822 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	BNIP3L	O60238	219 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	EPN2	O95208	641 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	IGSF6	O95976	241 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	IGHV4-34	P06331	123 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	ITGB7	P26010	798 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	PSMD8	P48556	350 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	CCR5	P51681	352 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	RAD51	Q06609	339 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	NOMO1	Q15155	1222 aa		10.83	□□□□□ -0.68
APBB3-209	ENST00000504872	LLGL1	Q15334	1064 aa		10.83	□□□□□ -0.68

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