RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 SLC25A52Q3SY17 297 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 MACC1Q6ZN28 852 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 STRADAQ7RTN6 431 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 TRABD2AQ86V40 505 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 C12orf29Q8N999 325 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 PCDH18Q9HCL0 1135 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 ABCC6O95255 1503 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 BCL9LQ86UU0 1499 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 BCLAF3A2AJT9 711 aaKnown RBP16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 B4GALT4O60513 344 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 CHN2P52757 468 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 COX10Q12887 443 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 C16orf72Q14CZ0 275 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 GPRIN3Q6ZVF9 776 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 CSGALNACT1Q8TDX6 532 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 AGAP11Q8TF27 550 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 DPF3Q92784 378 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 SLC39A8Q9C0K1 460 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 DYTNA2CJ06 578 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 FARP2O94887 1054 aaPredicted RBP16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 OTCP00480 354 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 FGF1P05230 155 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 LPOP22079 712 aaPredicted RBP16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 CRATP43155 626 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 SPIDRQ14159 915 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 PRAMEF19Q5SWL8 479 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 ZNF549Q6P9A3 640 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 ABHD15Q6UXT9 468 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 PACS1Q6VY07 963 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 CXorf40AQ8TE69 158 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 PIK3R5Q8WYR1 880 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 CENPIQ92674 756 aaPredicted RBP16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 POP5Q969H6 163 aaKnown RBP16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 MARK4Q96L34 752 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 VPS45Q9NRW7 570 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 CORO2BQ9UQ03 480 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 TBL1XO60907 577 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 SH3BGRLO75368 114 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 TSPAN19P0C672 248 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 SNHG28P0DPA3 235 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 CDK18Q07002 472 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 NRF1Q16656 503 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 SPANXN2Q5MJ10 180 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 ZNF655Q8N720 491 aaPredicted RBP16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 PIPSLA2A3N6 862 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 ZW10O43264 779 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 NDUFB5O43674 189 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 FTH1P02794 183 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 MMP8P22894 467 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 MAPK9P45984 424 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 VMP1Q96GC9 406 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 KREMEN1Q96MU8 473 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 DDX18Q9NVP1 670 aaKnown RBP16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 SESN1Q9Y6P5 492 aa16.65■□□□□ 0.26
PCDHA1-203ENST00000504120 ATP6V1C1P21283 382 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 USP41Q3LFD5 358 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 TTC27Q6P3X3 843 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 IRF2BP1Q8IU81 584 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 GRIN3AQ8TCU5 1115 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 MAGEE2Q8TD90 523 aaPredicted RBP16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 PWWP2AQ96N64 755 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 ASAH2Q9NR71 780 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 XPR1Q9UBH6 696 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 ZMYND8Q9ULU4 1186 aaPredicted RBP16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 WNT7AO00755 349 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 JAK1P23458 1154 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 PPTC7Q8NI37 304 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 PCDHB18PQ96TA0 734 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 OMDQ99983 421 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 TBC1D3BA6NDS4 549 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 ARF4P18085 180 aaPredicted RBP16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 PFKPQ01813 784 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 NOMO1Q15155 1222 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 C9orf57Q5W0N0 161 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 DHDDSQ86SQ9 333 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 LPPQ93052 612 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 MRPL45Q9BRJ2 306 aaKnown RBP16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 SPRTNQ9H040 489 aaPredicted RBP16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 RNF208Q9H0X6 261 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 RCOR3Q9P2K3 495 aaPredicted RBP16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 TRIM17Q9Y577 477 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 HGFP14210 728 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 CDC42P60953 191 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 STX4Q12846 297 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 ZFP28Q8NHY6 868 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 JOSD2Q8TAC2 188 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 SKA1Q96BD8 255 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 P2RY11Q96G91 374 aa16.64■□□□□ 0.25
PCDHA1-203ENST00000504120 PGK1P00558 417 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 FGFR3P22607 806 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 POLD2P49005 469 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 C21orf59P57076 290 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 MON1AQ86VX9 555 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 FAIM2Q9BWQ8 316 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 OR6C75A6NL08 312 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 DDX3YO15523 660 aaKnown RBP16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 PTDSS1P48651 473 aaKnown RBP16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 PRKG2Q13237 762 aa16.63■□□□□ 0.25
PCDHA1-203ENST00000504120 LCLAT1Q6UWP7 414 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms