RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 TDRPQ86YL5 185 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 CADM3Q8N126 398 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 GABPB2Q8TAK5 448 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 BCAS4Q8TDM0 211 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 WIPF2Q8TF74 440 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 SGCDQ92629 289 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 MOV10Q9HCE1 1003 aaKnown RBP5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 CCDC177Q9NQR7 707 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 FBXL17Q9UF56 701 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 CNOT8Q9UFF9 292 aaKnown RBP5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 CARD8Q9Y2G2 431 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 AAR2Q9Y312 384 aaKnown RBP5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 WNT6Q9Y6F9 365 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 FAM169AQ9Y6X4 670 aa5.53□□□□□ -1.52
HMGB1P3-201ENST00000502802 PEG3Q9GZU2 1588 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 BAZ1AQ9NRL2 1556 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 UBE2CO00762 179 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 CTDSP2O14595 271 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 RNMTO43148 476 aaKnown RBP5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 SLC25A12O75746 678 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 CD63P08962 238 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 PCNAP12004 261 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 SELLP14151 372 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 GLULP15104 373 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 RYKP34925 604 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 SLC15A1P46059 708 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 NRIP1P48552 1158 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 AIMP1Q12904 312 aaKnown RBP5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 COL28A1Q2UY09 1125 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 ZSCAN23Q3MJ62 389 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 C1QTNF12Q5T7M4 302 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 PRAMEF17Q5VTA0 474 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 SUMO4Q6EEV6 95 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 KIAA0930Q6ICG6 404 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 HMBOX1Q6NT76 420 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 FBXO42Q6P3S6 717 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 ADGRA1Q86SQ6 560 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 TRIM74Q86UV6 250 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 TRIM73Q86UV7 250 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 RASSF8Q8NHQ8 419 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 ATOH1Q92858 354 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 ZKSCAN4Q969J2 545 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 SLC22A18Q96BI1 424 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 SARAFQ96BY9 339 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 ARHGEF26Q96DR7 871 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 TTC14Q96N46 770 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 SIN3AQ96ST3 1273 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 EFHD1Q9BUP0 239 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 DUSP26Q9BV47 211 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 SIL1Q9H173 461 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 OR10A4Q9H209 315 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 PDZD7Q9H5P4 517 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 SLC35C2Q9NQQ7 365 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 ASB6Q9NWX5 421 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 NENFQ9UMX5 172 aa5.52□□□□□ -1.53
HMGB1P3-201ENST00000502802 AOX1Q06278 1338 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 A0A096LPK6 155 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 TRBV5-7A0A0A0MS05 114 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 FAM237AA0A1B0GTK4 181 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 DDTLA6NHG4 134 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 NPIPB8E9PQR5 432 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 NHLRC4P0CG21 123 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 TMEM11P17152 192 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 HOXA13P31271 388 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 CIITAP33076 1130 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 GPR12P47775 334 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 LMAN1P49257 510 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 MFAP4P55083 255 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 RRP1P56182 461 aaKnown RBP5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 HSF1Q00613 529 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 PMPCAQ10713 525 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 GRIK3Q13003 919 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 TNFAIP1Q13829 316 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 DRAP1Q14919 205 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 PCLAFQ15004 111 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 PLCB4Q15147 1175 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 SHBQ15464 509 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 PROSER3Q2NL68 480 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 ASTE1Q2TB18 679 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 ALG10Q5BKT4 473 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 ALG10BQ5I7T1 473 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 EARS2Q5JPH6 523 aaKnown RBP5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 CXorf66Q5JRM2 361 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 IGFL4Q6B9Z1 124 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 ZNF813Q6ZN06 617 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 TMC8Q8IU68 726 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 LURAP1LQ8IV03 231 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 LINC00346Q8IVM7 164 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 ADGRF4Q8IZF3 695 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 ZCCHC9Q8N567 271 aaKnown RBP5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 DPP10Q8N608 796 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 POMGNT2Q8NAT1 580 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 AVL9Q8NBF6 648 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 OSR1Q8TAX0 266 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 PRPF31Q8WWY3 499 aaKnown RBP5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 LARP4BQ92615 738 aaKnown RBP5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 MAP4K1Q92918 833 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 CLMNQ96JQ2 1002 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 TMEM68Q96MH6 324 aa5.51□□□□□ -1.53
HMGB1P3-201ENST00000502802 SRSF8Q9BRL6 282 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms