RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 TM7SF2O76062 418 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 UGT2B4P06133 528 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 ALPIP09923 528 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 ITIH1P19827 911 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 CCKBRP32239 447 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 KRT9P35527 623 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 PTK2Q05397 1052 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 POLD3Q15054 466 aaPredicted RBP14.13□□□□□ -0.15
CCDC58-207ENST00000498466 TBR1Q16650 682 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 KIF26BQ2KJY2 2108 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 LRRC73Q5JTD7 316 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 TRIM65Q6PJ69 517 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 LVRNQ6Q4G3 990 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 TTC7BQ86TV6 843 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 ZDHHC17Q8IUH5 632 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 LURAP1LQ8IV03 231 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 HID1Q8IV36 788 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 PLPP6Q8IY26 295 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 CXorf40AQ8TE69 158 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 ISG20Q96AZ6 181 aaKnown RBP14.13□□□□□ -0.15
CCDC58-207ENST00000498466 PGAP3Q96FM1 320 aaPredicted RBP14.13□□□□□ -0.15
CCDC58-207ENST00000498466 KLHL32Q96NJ5 620 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 EPAS1Q99814 870 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 SEMA3CQ99985 751 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 LRRN3Q9H3W5 708 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 MBNL1Q9NR56 388 aaKnown RBP14.13□□□□□ -0.15
CCDC58-207ENST00000498466 ZNF212Q9UDV6 495 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 MAN1B1Q9UKM7 699 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 GPR34Q9UPC5 381 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 PCDHB11Q9Y5F2 797 aa14.13□□□□□ -0.15
CCDC58-207ENST00000498466 RP1P56715 2156 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 PRAMEF33A0A0G2JMD5 474 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 TOR1BO14657 336 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 AREL1O15033 823 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 PRAMEF10O60809 474 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 CD160O95971 181 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 ACVRL1P37023 503 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 HK3P52790 923 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 MARSP56192 900 aaKnown RBP14.12□□□□□ -0.15
CCDC58-207ENST00000498466 STX17P56962 302 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 SNRPD1P62314 119 aaKnown RBP14.12□□□□□ -0.15
CCDC58-207ENST00000498466 CYP4F2P78329 520 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 TLE1Q04724 770 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 KLHL40Q2TBA0 621 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 SLC25A52Q3SY17 297 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 RD3Q7Z3Z2 195 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 GKN2Q86XP6 184 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 TP53I13Q8NBR0 393 aaPredicted RBP14.12□□□□□ -0.15
CCDC58-207ENST00000498466 OR6C4Q8NGE1 309 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 OR2AP1Q8NGE2 309 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 NT5C3BQ969T7 300 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 TSACCQ96A04 125 aaPredicted RBP14.12□□□□□ -0.15
CCDC58-207ENST00000498466 HAPLN3Q96S86 360 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 OSBPL1AQ9BXW6 950 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 EDEM3Q9BZQ6 932 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 PLCB1Q9NQ66 1216 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 APEX2Q9UBZ4 518 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 SEPT3Q9UH03 358 aa14.12□□□□□ -0.15
CCDC58-207ENST00000498466 PPP1R3GB7ZBB8 358 aa14.11□□□□□ -0.15
CCDC58-207ENST00000498466 RASGRP1O95267 797 aa14.11□□□□□ -0.15
CCDC58-207ENST00000498466 POP4O95707 220 aaKnown RBP14.11□□□□□ -0.15
CCDC58-207ENST00000498466 GSRP00390 522 aa14.11□□□□□ -0.15
CCDC58-207ENST00000498466 SLC9A1P19634 815 aa14.11□□□□□ -0.15
CCDC58-207ENST00000498466 ETFBP38117 255 aa14.11□□□□□ -0.15
CCDC58-207ENST00000498466 MAPK10P53779 464 aa14.11□□□□□ -0.15
CCDC58-207ENST00000498466 GEMIN4P57678 1058 aaKnown RBP14.11□□□□□ -0.15
CCDC58-207ENST00000498466 APBA1Q02410 837 aa14.11□□□□□ -0.15
CCDC58-207ENST00000498466 ALG11Q2TAA5 492 aa14.11□□□□□ -0.15
CCDC58-207ENST00000498466 MYLK3Q32MK0 819 aa14.11□□□□□ -0.15
CCDC58-207ENST00000498466 ARTNQ5T4W7 220 aa14.11□□□□□ -0.15
CCDC58-207ENST00000498466 FAM102AQ5T9C2 384 aaPredicted RBP14.11□□□□□ -0.15
CCDC58-207ENST00000498466 FOXR2Q6PJQ5 311 aa14.11□□□□□ -0.15
CCDC58-207ENST00000498466 ENPP7Q6UWV6 458 aa14.11□□□□□ -0.15
CCDC58-207ENST00000498466 GDPD4Q6W3E5 623 aa14.11□□□□□ -0.15
CCDC58-207ENST00000498466 ZFAND4Q86XD8 727 aa14.11□□□□□ -0.15
CCDC58-207ENST00000498466 CCNJLQ8IV13 435 aa14.11□□□□□ -0.15
CCDC58-207ENST00000498466 Q8N9G6 341 aaPredicted RBP14.11□□□□□ -0.15
CCDC58-207ENST00000498466 SHC3Q92529 594 aa14.11□□□□□ -0.15
CCDC58-207ENST00000498466 ARHGEF2Q92974 986 aaKnown RBP14.11□□□□□ -0.15
CCDC58-207ENST00000498466 WRAP53Q9BUR4 548 aaKnown RBP14.11□□□□□ -0.15
CCDC58-207ENST00000498466 SLC25A18Q9H1K4 315 aa14.11□□□□□ -0.15
CCDC58-207ENST00000498466 TMEM51Q9NW97 253 aa14.11□□□□□ -0.15
CCDC58-207ENST00000498466 HPCAL4Q9UM19 191 aa14.11□□□□□ -0.15
CCDC58-207ENST00000498466 RELNP78509 3460 aa14.11□□□□□ -0.15
CCDC58-207ENST00000498466 PTPN13Q12923 2485 aa14.1□□□□□ -0.15
CCDC58-207ENST00000498466 TMEM110-MUSTN1A8MSY1 372 aa14.1□□□□□ -0.15
CCDC58-207ENST00000498466 NTRK1P04629 796 aa14.1□□□□□ -0.15
CCDC58-207ENST00000498466 ITIH2P19823 946 aa14.1□□□□□ -0.15
CCDC58-207ENST00000498466 HTR1BP28222 390 aa14.1□□□□□ -0.15
CCDC58-207ENST00000498466 PEX5P50542 639 aa14.1□□□□□ -0.15
CCDC58-207ENST00000498466 LRRC14Q15048 493 aa14.1□□□□□ -0.15
CCDC58-207ENST00000498466 IRF4Q15306 451 aa14.1□□□□□ -0.15
CCDC58-207ENST00000498466 ATXN7L2Q5T6C5 722 aaPredicted RBP14.1□□□□□ -0.15
CCDC58-207ENST00000498466 LEKR1Q6ZMV7 388 aa14.1□□□□□ -0.15
CCDC58-207ENST00000498466 SLC47A2Q86VL8 602 aa14.1□□□□□ -0.15
CCDC58-207ENST00000498466 FAM131BQ86XD5 332 aa14.1□□□□□ -0.15
CCDC58-207ENST00000498466 CREBRFQ8IUR6 639 aa14.1□□□□□ -0.15
CCDC58-207ENST00000498466 USP7Q93009 1102 aa14.1□□□□□ -0.15
CCDC58-207ENST00000498466 TMEM159Q96B96 161 aa14.1□□□□□ -0.15
CCDC58-207ENST00000498466 TIGD1Q96MW7 591 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms