RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 SETD9Q8NE22 299 aa3.93□□□□□ -1.78
SMC4-227ENST00000497984 LRRC8CQ8TDW0 803 aa3.93□□□□□ -1.78
SMC4-227ENST00000497984 MTBPQ96DY7 904 aa3.93□□□□□ -1.78
SMC4-227ENST00000497984 LRFN5Q96NI6 719 aa3.93□□□□□ -1.78
SMC4-227ENST00000497984 EGLN1Q9GZT9 426 aa3.93□□□□□ -1.78
SMC4-227ENST00000497984 ATP8A2Q9NTI2 1148 aa3.93□□□□□ -1.78
SMC4-227ENST00000497984 ZFP57Q9NU63 452 aa3.93□□□□□ -1.78
SMC4-227ENST00000497984 HDAC6Q9UBN7 1215 aa3.93□□□□□ -1.78
SMC4-227ENST00000497984 CLDN16Q9Y5I7 305 aa3.93□□□□□ -1.78
SMC4-227ENST00000497984 SYT5O00445 386 aa3.92□□□□□ -1.78
SMC4-227ENST00000497984 AMBPP02760 352 aa3.92□□□□□ -1.78
SMC4-227ENST00000497984 SETSIPP0DME0 302 aa3.92□□□□□ -1.78
SMC4-227ENST00000497984 ATP12AP54707 1039 aa3.92□□□□□ -1.78
SMC4-227ENST00000497984 GALNT1Q10472 559 aaPredicted RBP3.92□□□□□ -1.78
SMC4-227ENST00000497984 BYSLQ13895 437 aaKnown RBP3.92□□□□□ -1.78
SMC4-227ENST00000497984 PFKFB4Q16877 469 aa3.92□□□□□ -1.78
SMC4-227ENST00000497984 AP5B1Q2VPB7 878 aa3.92□□□□□ -1.78
SMC4-227ENST00000497984 PLEKHA7Q6IQ23 1121 aa3.92□□□□□ -1.78
SMC4-227ENST00000497984 XRRA1Q6P2D8 792 aa3.92□□□□□ -1.78
SMC4-227ENST00000497984 MON1AQ86VX9 555 aa3.92□□□□□ -1.78
SMC4-227ENST00000497984 RASSF8Q8NHQ8 419 aa3.92□□□□□ -1.78
SMC4-227ENST00000497984 FBXO17Q96EF6 278 aa3.92□□□□□ -1.78
SMC4-227ENST00000497984 LRCH1Q9Y2L9 728 aa3.92□□□□□ -1.78
SMC4-227ENST00000497984 TP53BP1Q12888 1972 aaPredicted RBP3.91□□□□□ -1.78
SMC4-227ENST00000497984 hDV102S1A0JD36 115 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 EDIL3O43854 480 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 SLC22A3O75751 556 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 CSF1P09603 554 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 DHRS4L1P0CG22 281 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 PDIA3P30101 505 aaKnown RBP3.91□□□□□ -1.78
SMC4-227ENST00000497984 TIMP3P35625 211 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 SERPINF1P36955 418 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 PNPLA4P41247 253 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 CENPAP49450 140 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 ECT2LQ008S8 904 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 TNFAIP2Q03169 654 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 ZNF155Q12901 538 aaPredicted RBP3.91□□□□□ -1.78
SMC4-227ENST00000497984 THOC5Q13769 683 aaKnown RBP3.91□□□□□ -1.78
SMC4-227ENST00000497984 IL13RA2Q14627 380 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 ACCSLQ4AC99 568 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 RUNDC3AQ59EK9 446 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 PGBD2Q6P3X8 592 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 GGT6Q6P531 493 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 KLHL17Q6TDP4 642 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 RRAGAQ7L523 313 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 KRTAP7-1Q8IUC3 87 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 DENND6AQ8IWF6 608 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 CCDC105Q8IYK2 499 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 SPATA22Q8NHS9 363 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 LNX1Q8TBB1 728 aaPredicted RBP3.91□□□□□ -1.78
SMC4-227ENST00000497984 ARRDC2Q8TBH0 407 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 WDR12Q9GZL7 423 aaKnown RBP3.91□□□□□ -1.78
SMC4-227ENST00000497984 PLEKHA2Q9HB19 425 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 LRRC4Q9HBW1 653 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 PTPRHQ9HD43 1115 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 ZNF224Q9NZL3 707 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 SLCO3A1Q9UIG8 710 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 PAM16Q9Y3D7 125 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 ZNF711Q9Y462 761 aa3.91□□□□□ -1.78
SMC4-227ENST00000497984 A0A087WV62 115 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 ZNF587BE7ETH6 402 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 HSPA12AO43301 675 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 FGF17O60258 216 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 METTL18O95568 372 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 IL1AP01583 271 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 FGF5P12034 268 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 KCNA5P22460 613 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 MARK3P27448 753 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 TTKP33981 857 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 FUT6P51993 359 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 ERVK11-1P61568 191 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 ARHGAP8P85298 464 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 TNFAIP1Q13829 316 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 UBE4AQ14139 1066 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 PLA2G4FQ68DD2 849 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 SATL1Q86VE3 508 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 SAMD3Q8N6K7 520 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 FSIP1Q8NA03 581 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 ZNF527Q8NB42 609 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 ZMIZ2Q8NF64 920 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 RNF183Q96D59 192 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 CSF3RQ99062 836 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 TRMT61BQ9BVS5 477 aaKnown RBP3.9□□□□□ -1.79
SMC4-227ENST00000497984 ZNF696Q9H7X3 374 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 ZNF334Q9HCZ1 680 aaPredicted RBP3.9□□□□□ -1.79
SMC4-227ENST00000497984 ANKRD10Q9NXR5 420 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 CGNL1Q0VF96 1302 aa3.9□□□□□ -1.79
SMC4-227ENST00000497984 A0A1B0GU03 582 aa3.89□□□□□ -1.79
SMC4-227ENST00000497984 CCDC194A0A1B0GVG4 234 aa3.89□□□□□ -1.79
SMC4-227ENST00000497984 ABHD14A-ACY1A0A1B0GW23 586 aa3.89□□□□□ -1.79
SMC4-227ENST00000497984 WNT9BO14905 357 aa3.89□□□□□ -1.79
SMC4-227ENST00000497984 SKAP2O75563 359 aaPredicted RBP3.89□□□□□ -1.79
SMC4-227ENST00000497984 TBX6O95947 436 aaPredicted RBP3.89□□□□□ -1.79
SMC4-227ENST00000497984 CDKN1AP38936 164 aa3.89□□□□□ -1.79
SMC4-227ENST00000497984 LIFRP42702 1097 aa3.89□□□□□ -1.79
SMC4-227ENST00000497984 CHAF1AQ13111 956 aaPredicted RBP3.89□□□□□ -1.79
SMC4-227ENST00000497984 OASLQ15646 514 aaKnown RBP3.89□□□□□ -1.79
SMC4-227ENST00000497984 C19orf48Q6RUI8 117 aa3.89□□□□□ -1.79
SMC4-227ENST00000497984 SYT13Q7L8C5 426 aa3.89□□□□□ -1.79
SMC4-227ENST00000497984 DGLUCYQ7Z3D6 616 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms