RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 CINPQ9BW66 212 aaPredicted RBP11.39□□□□□ -0.59
ERCC8-208ENST00000497892 CPEB1Q9BZB8 566 aaKnown RBP11.39□□□□□ -0.59
ERCC8-208ENST00000497892 CAPN10Q9HC96 672 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 PREBQ9HCU5 417 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 DTLQ9NZJ0 730 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 SEPT3Q9UH03 358 aa11.39□□□□□ -0.59
ERCC8-208ENST00000497892 EIF2B4Q9UI10 523 aaKnown RBP11.39□□□□□ -0.59
ERCC8-208ENST00000497892 TPX2Q9ULW0 747 aaKnown RBP11.39□□□□□ -0.59
ERCC8-208ENST00000497892 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.39□□□□□ -0.59
ERCC8-208ENST00000497892 TP53BP1Q12888 1972 aaPredicted RBP11.39□□□□□ -0.59
ERCC8-208ENST00000497892 A0A0U1RQJ8 604 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 MACROD2A1Z1Q3 448 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 GRID2IPA4D2P6 1211 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 APOL1O14791 398 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 MUSKO15146 869 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 INSIG1O15503 277 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 CFIP05156 583 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 UGT2B4P06133 528 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 SERPINF2P08697 491 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 ADRB3P13945 408 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 GNSP15586 552 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 MX2P20592 715 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 CD27P26842 260 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 MAOBP27338 520 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 HSPA9P38646 679 aaKnown RBP11.38□□□□□ -0.59
ERCC8-208ENST00000497892 CDKN2BP42772 138 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 NAP1L1P55209 391 aaKnown RBP11.38□□□□□ -0.59
ERCC8-208ENST00000497892 PPP2CBP62714 309 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 PPP2CAP67775 309 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 RAD51Q06609 339 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 ZNF235Q14590 738 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 GRM3Q14832 879 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 IFI16Q16666 785 aaKnown RBP11.38□□□□□ -0.59
ERCC8-208ENST00000497892 DUOXA1Q1HG43 343 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 ODF2Q5BJF6 829 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 MFSD7Q6UXD7 560 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 GDPD4Q6W3E5 623 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 SPOCD1Q6ZMY3 1216 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 TRIM69Q86WT6 500 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 EXD1Q8NHP7 514 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 KIAA1524Q8TCG1 905 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.38□□□□□ -0.59
ERCC8-208ENST00000497892 KRT35Q92764 455 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 HDAC11Q96DB2 347 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 TSGA13Q96PP4 275 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 TUBGCP5Q96RT8 1024 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 REPIN1Q9BWE0 567 aaKnown RBP11.38□□□□□ -0.59
ERCC8-208ENST00000497892 TRIM10Q9UDY6 481 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 SLC6A14Q9UN76 642 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 SLCO1B1Q9Y6L6 691 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 ADAMTS9Q9P2N4 1935 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 DNAH14Q0VDD8 3507 aa11.38□□□□□ -0.59
ERCC8-208ENST00000497892 TBC1D3DA0A087WVF3 549 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 TBC1D3IA0A087WXS9 549 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 TBC1D3EA0A087X179 549 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 TBC1D3KA0A087X1G2 549 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 A0A1B0GTW7 788 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 A0A1W2PPC4 97 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 TSPAN11A1L157 253 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 CCDC66A2RUB6 948 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 TBC1D3FA6NER0 549 aaPredicted RBP11.37□□□□□ -0.59
ERCC8-208ENST00000497892 C16orf96A6NNT2 1141 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 PRR5-ARHGAP8B1AHC4 643 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 TBC1D3LB9A6J9 549 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 BCAT2O15382 392 aaPredicted RBP11.37□□□□□ -0.59
ERCC8-208ENST00000497892 SPINT1O43278 529 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 AP1G1O43747 822 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 MAP3K6O95382 1288 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 TBC1D3HP0C7X1 549 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 ZFXP17010 805 aaPredicted RBP11.37□□□□□ -0.59
ERCC8-208ENST00000497892 CR2P20023 1033 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 CTNNA2P26232 953 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 ABL2P42684 1182 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 MMP13P45452 471 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 MAPK8P45983 427 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 RENBPP51606 427 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 AP1S1P61966 158 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 IRX4P78413 519 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 ARHGAP8P85298 464 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 CCZ1BP86790 482 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 CCZ1P86791 482 aaPredicted RBP11.37□□□□□ -0.59
ERCC8-208ENST00000497892 NSUN2Q08J23 767 aaKnown RBP eCLIP11.37□□□□□ -0.59
ERCC8-208ENST00000497892 SLC10A2Q12908 348 aaPredicted RBP11.37□□□□□ -0.59
ERCC8-208ENST00000497892 AASDHQ4L235 1098 aaPredicted RBP11.37□□□□□ -0.59
ERCC8-208ENST00000497892 MARC1Q5VT66 337 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 TBC1D3GQ6DHY5 549 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 TBC1D3CQ6IPX1 549 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 TIGD7Q6NT04 549 aaPredicted RBP11.37□□□□□ -0.59
ERCC8-208ENST00000497892 NEK5Q6P3R8 708 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 FBXL19Q6PCT2 694 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 SRLQ86TD4 932 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 TBC1D3Q8IZP1 549 aaPredicted RBP11.37□□□□□ -0.59
ERCC8-208ENST00000497892 BBS5Q8N3I7 341 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 PGBD5Q8N414 524 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 NSMCE1Q8WV22 266 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 MAML1Q92585 1016 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 RAB7BQ96AH8 199 aa11.37□□□□□ -0.59
ERCC8-208ENST00000497892 RBM41Q96IZ5 413 aaKnown RBP11.37□□□□□ -0.59
ERCC8-208ENST00000497892 ZNF641Q96N77 438 aaPredicted RBP11.37□□□□□ -0.59
ERCC8-208ENST00000497892 ZNF830Q96NB3 372 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms