RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 COLCA1Q6ZS62 124 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 SLC46A3Q7Z3Q1 461 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 TMEM199Q8N511 208 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 CADM4Q8NFZ8 388 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 ETNPPLQ8TBG4 499 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 SLC35F5Q8WV83 523 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 LPAR1Q92633 364 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 TMEM18Q96B42 140 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 H2AFJQ9BTM1 129 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 C1QTNF7Q9BXJ2 289 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 NPFFR1Q9GZQ6 430 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 CTNNAL1Q9UBT7 734 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 NDRG3Q9UGV2 375 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 A4GNTQ9UNA3 340 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 CARD8Q9Y2G2 431 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 PGPEP1LA6NFU8 196 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 SEC31AO94979 1220 aaKnown RBP5.01□□□□□ -1.61
VPS36-206ENST00000497149 SYF2O95926 243 aaKnown RBP5.01□□□□□ -1.61
VPS36-206ENST00000497149 IRF1P10914 325 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 PSMA4P25789 261 aaKnown RBP5.01□□□□□ -1.61
VPS36-206ENST00000497149 DCTDP32321 178 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 POLD2P49005 469 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 GNAQP50148 359 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 RPS3AP61247 264 aaKnown RBP5.01□□□□□ -1.61
VPS36-206ENST00000497149 DCAF7P61962 342 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 RPL7AP62424 266 aaKnown RBP5.01□□□□□ -1.61
VPS36-206ENST00000497149 FAM27E3Q08E93 113 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 PPP2R5BQ15173 497 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 RNPS1Q15287 305 aaKnown RBP5.01□□□□□ -1.61
VPS36-206ENST00000497149 PRTGQ2VWP7 1150 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 ODF3L2Q3SX64 289 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 DCAF12L2Q5VW00 463 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 CES5AQ6NT32 575 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 CDC73Q6P1J9 531 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 C4orf50Q6ZRC1 276 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 C1QL2Q7Z5L3 287 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 PIM3Q86V86 326 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 DENND6AQ8IWF6 608 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 ANKRD52Q8NB46 1076 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 TMEM163Q8TC26 289 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 PIP5K1AQ99755 562 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 NUF2Q9BZD4 464 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 PRKRIP1Q9H875 184 aaPredicted RBP5.01□□□□□ -1.61
VPS36-206ENST00000497149 ANKRD10Q9NXR5 420 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 NCKIPSDQ9NZQ3 722 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 RAI2Q9Y5P3 530 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 PSAT1Q9Y617 370 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 PIAS3Q9Y6X2 628 aa5.01□□□□□ -1.61
VPS36-206ENST00000497149 TTC36A6NLP5 189 aa5□□□□□ -1.61
VPS36-206ENST00000497149 LRRC53A6NM62 1247 aa5□□□□□ -1.61
VPS36-206ENST00000497149 HSPB2A8KAH6 182 aa5□□□□□ -1.61
VPS36-206ENST00000497149 H0YGN5 161 aa5□□□□□ -1.61
VPS36-206ENST00000497149 IFNL4K9M1U5 179 aa5□□□□□ -1.61
VPS36-206ENST00000497149 ATP2C2O75185 946 aa5□□□□□ -1.61
VPS36-206ENST00000497149 SEC14L2O76054 403 aa5□□□□□ -1.61
VPS36-206ENST00000497149 TFP02787 698 aa5□□□□□ -1.61
VPS36-206ENST00000497149 SPARCP09486 303 aa5□□□□□ -1.61
VPS36-206ENST00000497149 PSG1P11464 419 aa5□□□□□ -1.61
VPS36-206ENST00000497149 ARSBP15848 533 aa5□□□□□ -1.61
VPS36-206ENST00000497149 GABRB2P47870 512 aa5□□□□□ -1.61
VPS36-206ENST00000497149 EIF5P55010 431 aaKnown RBP5□□□□□ -1.61
VPS36-206ENST00000497149 ERV3-1Q14264 604 aa5□□□□□ -1.61
VPS36-206ENST00000497149 HSPB2Q16082 182 aa5□□□□□ -1.61
VPS36-206ENST00000497149 PRAMEF19Q5SWL8 479 aa5□□□□□ -1.61
VPS36-206ENST00000497149 IRF2BP2Q7Z5L9 587 aa5□□□□□ -1.61
VPS36-206ENST00000497149 CTU1Q7Z7A3 348 aaKnown RBP5□□□□□ -1.61
VPS36-206ENST00000497149 DHX40Q8IX18 779 aaKnown RBP5□□□□□ -1.61
VPS36-206ENST00000497149 C7orf57Q8NEG2 295 aa5□□□□□ -1.61
VPS36-206ENST00000497149 GJC3Q8NFK1 279 aa5□□□□□ -1.61
VPS36-206ENST00000497149 SNAPC3Q92966 411 aa5□□□□□ -1.61
VPS36-206ENST00000497149 VOPP1Q96AW1 172 aa5□□□□□ -1.61
VPS36-206ENST00000497149 ZC3HAV1LQ96H79 300 aaKnown RBP5□□□□□ -1.61
VPS36-206ENST00000497149 BBS4Q96RK4 519 aa5□□□□□ -1.61
VPS36-206ENST00000497149 GFM1Q96RP9 751 aaKnown RBP5□□□□□ -1.61
VPS36-206ENST00000497149 MSTO1Q9BUK6 570 aa5□□□□□ -1.61
VPS36-206ENST00000497149 PLEKHA4Q9H4M7 779 aa5□□□□□ -1.61
VPS36-206ENST00000497149 BLOC1S4Q9NUP1 217 aa5□□□□□ -1.61
VPS36-206ENST00000497149 INTS6Q9UL03 887 aaKnown RBP5□□□□□ -1.61
VPS36-206ENST00000497149 FAM96BQ9Y3D0 163 aa5□□□□□ -1.61
VPS36-206ENST00000497149 SCINQ9Y6U3 715 aa5□□□□□ -1.61
VPS36-206ENST00000497149 ZNF521Q96K83 1311 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 A0A0U1RQF3 1178 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 PI4KAP2A4QPH2 592 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 NPIPB11E5RHQ5 1161 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 I6L893 689 aaPredicted RBP4.99□□□□□ -1.61
VPS36-206ENST00000497149 CHL1O00533 1208 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 MT-CYBP00156 380 aaPredicted RBP4.99□□□□□ -1.61
VPS36-206ENST00000497149 TFPIP10646 304 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 GNLYP22749 145 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 BSGP35613 385 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 RARSP54136 660 aaKnown RBP4.99□□□□□ -1.61
VPS36-206ENST00000497149 ZP1P60852 638 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 SETQ01105 290 aaPredicted RBP4.99□□□□□ -1.61
VPS36-206ENST00000497149 TMEM115Q12893 351 aaPredicted RBP4.99□□□□□ -1.61
VPS36-206ENST00000497149 FOXD4Q12950 439 aaPredicted RBP4.99□□□□□ -1.61
VPS36-206ENST00000497149 GRIK3Q13003 919 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 LAMB3Q13751 1172 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 CCNG2Q16589 344 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 SOWAHAQ2M3V2 549 aa4.99□□□□□ -1.61
VPS36-206ENST00000497149 ESCO2Q56NI9 601 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms