RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 DKK3Q9UBP4 350 aa20.88■□□□□ 0.93
COL9A2-211ENST00000496215 SEPT3Q9UH03 358 aa20.88■□□□□ 0.93
COL9A2-211ENST00000496215 GGT7Q9UJ14 662 aa20.88■□□□□ 0.93
COL9A2-211ENST00000496215 CA5BQ9Y2D0 317 aa20.88■□□□□ 0.93
COL9A2-211ENST00000496215 BTBD3Q9Y2F9 522 aa20.88■□□□□ 0.93
COL9A2-211ENST00000496215 PCDHB9Q9Y5E1 797 aa20.88■□□□□ 0.93
COL9A2-211ENST00000496215 MAP1BP46821 2468 aaKnown RBP20.88■□□□□ 0.93
COL9A2-211ENST00000496215 A0A1B0GTQ1 180 aa20.87■□□□□ 0.93
COL9A2-211ENST00000496215 YKT6O15498 198 aa20.87■□□□□ 0.93
COL9A2-211ENST00000496215 SPINT1O43278 529 aa20.87■□□□□ 0.93
COL9A2-211ENST00000496215 PCDHGA12O60330 932 aa20.87■□□□□ 0.93
COL9A2-211ENST00000496215 SPINK2P20155 84 aa20.87■□□□□ 0.93
COL9A2-211ENST00000496215 XPAP23025 273 aaPredicted RBP20.87■□□□□ 0.93
COL9A2-211ENST00000496215 RGRP47804 291 aa20.87■□□□□ 0.93
COL9A2-211ENST00000496215 ARRB1P49407 418 aaPredicted RBP20.87■□□□□ 0.93
COL9A2-211ENST00000496215 TAS2R40P59535 323 aa20.87■□□□□ 0.93
COL9A2-211ENST00000496215 SHC2P98077 582 aa20.87■□□□□ 0.93
COL9A2-211ENST00000496215 MMRN1Q13201 1228 aa20.87■□□□□ 0.93
COL9A2-211ENST00000496215 ZNF235Q14590 738 aa20.87■□□□□ 0.93
COL9A2-211ENST00000496215 LBRQ14739 615 aaKnown RBP20.87■□□□□ 0.93
COL9A2-211ENST00000496215 PDK2Q15119 407 aa20.87■□□□□ 0.93
COL9A2-211ENST00000496215 LRRC73Q5JTD7 316 aa20.87■□□□□ 0.93
COL9A2-211ENST00000496215 ZFYVE27Q5T4F4 411 aa20.87■□□□□ 0.93
COL9A2-211ENST00000496215 DBX2Q6ZNG2 339 aa20.87■□□□□ 0.93
COL9A2-211ENST00000496215 KCTD6Q8NC69 237 aa20.87■□□□□ 0.93
COL9A2-211ENST00000496215 ANP32EQ9BTT0 268 aa20.87■□□□□ 0.93
COL9A2-211ENST00000496215 ATP13A3Q9H7F0 1226 aa20.87■□□□□ 0.93
COL9A2-211ENST00000496215 PCOLCE2Q9UKZ9 415 aa20.87■□□□□ 0.93
COL9A2-211ENST00000496215 INTUQ9ULD6 942 aa20.87■□□□□ 0.93
COL9A2-211ENST00000496215 MFSD11O43934 449 aa20.86■□□□□ 0.93
COL9A2-211ENST00000496215 MTA2O94776 668 aa20.86■□□□□ 0.93
COL9A2-211ENST00000496215 SERPINA4P29622 427 aa20.86■□□□□ 0.93
COL9A2-211ENST00000496215 ARHGAP25P42331 645 aa20.86■□□□□ 0.93
COL9A2-211ENST00000496215 CSNK1DP48730 415 aa20.86■□□□□ 0.93
COL9A2-211ENST00000496215 RENBPP51606 427 aa20.86■□□□□ 0.93
COL9A2-211ENST00000496215 ARSEP51690 589 aa20.86■□□□□ 0.93
COL9A2-211ENST00000496215 FOXC1Q12948 553 aa20.86■□□□□ 0.93
COL9A2-211ENST00000496215 SHBQ15464 509 aa20.86■□□□□ 0.93
COL9A2-211ENST00000496215 ATP13A4Q4VNC1 1196 aa20.86■□□□□ 0.93
COL9A2-211ENST00000496215 PRAMEF14Q5SWL7 426 aa20.86■□□□□ 0.93
COL9A2-211ENST00000496215 SRLQ86TD4 932 aa20.86■□□□□ 0.93
COL9A2-211ENST00000496215 TTC7BQ86TV6 843 aa20.86■□□□□ 0.93
COL9A2-211ENST00000496215 MAP7D3Q8IWC1 876 aa20.86■□□□□ 0.93
COL9A2-211ENST00000496215 BAHD1Q8TBE0 780 aaPredicted RBP20.86■□□□□ 0.93
COL9A2-211ENST00000496215 KLHDC7BQ96G42 594 aa20.86■□□□□ 0.93
COL9A2-211ENST00000496215 ZNF641Q96N77 438 aaPredicted RBP20.86■□□□□ 0.93
COL9A2-211ENST00000496215 SLC17A9Q9BYT1 436 aa20.86■□□□□ 0.93
COL9A2-211ENST00000496215 ERVMER34-1Q9H9K5 563 aa20.86■□□□□ 0.93
COL9A2-211ENST00000496215 ANGPTL2Q9UKU9 493 aa20.86■□□□□ 0.93
COL9A2-211ENST00000496215 USP24Q9UPU5 2620 aa20.85■□□□□ 0.93
COL9A2-211ENST00000496215 TSPAN11A1L157 253 aa20.85■□□□□ 0.93
COL9A2-211ENST00000496215 A6NNZ2 444 aa20.85■□□□□ 0.93
COL9A2-211ENST00000496215 AREL1O15033 823 aa20.85■□□□□ 0.93
COL9A2-211ENST00000496215 THEGLP0DJG4 465 aa20.85■□□□□ 0.93
COL9A2-211ENST00000496215 IL4RP24394 825 aa20.85■□□□□ 0.93
COL9A2-211ENST00000496215 GRK6P43250 576 aa20.85■□□□□ 0.93
COL9A2-211ENST00000496215 SUOXP51687 545 aa20.85■□□□□ 0.93
COL9A2-211ENST00000496215 ELP6Q0PNE2 266 aa20.85■□□□□ 0.93
COL9A2-211ENST00000496215 SGCGQ13326 291 aa20.85■□□□□ 0.93
COL9A2-211ENST00000496215 TRIP6Q15654 476 aaKnown RBP20.85■□□□□ 0.93
COL9A2-211ENST00000496215 NCBP2-AS2Q69YL0 99 aa20.85■□□□□ 0.93
COL9A2-211ENST00000496215 BRAT1Q6PJG6 821 aa20.85■□□□□ 0.93
COL9A2-211ENST00000496215 GCNT7Q6ZNI0 430 aa20.85■□□□□ 0.93
COL9A2-211ENST00000496215 SPATS2Q86XZ4 545 aaKnown RBP20.85■□□□□ 0.93
COL9A2-211ENST00000496215 BBS5Q8N3I7 341 aa20.85■□□□□ 0.93
COL9A2-211ENST00000496215 HCAR2Q8TDS4 363 aa20.85■□□□□ 0.93
COL9A2-211ENST00000496215 CXorf40AQ8TE69 158 aa20.85■□□□□ 0.93
COL9A2-211ENST00000496215 NSMCE1Q8WV22 266 aa20.85■□□□□ 0.93
COL9A2-211ENST00000496215 PSKH2Q96QS6 385 aa20.85■□□□□ 0.93
COL9A2-211ENST00000496215 SUV39H2Q9H5I1 410 aa20.85■□□□□ 0.93
COL9A2-211ENST00000496215 KMT2BQ9UMN6 2715 aaPredicted RBP20.85■□□□□ 0.93
COL9A2-211ENST00000496215 SHROOM3Q8TF72 1996 aa20.85■□□□□ 0.93
COL9A2-211ENST00000496215 TRPM6Q9BX84 2022 aa20.84■□□□□ 0.93
COL9A2-211ENST00000496215 COL5A1P20908 1838 aaPredicted RBP20.84■□□□□ 0.93
COL9A2-211ENST00000496215 IGLON5A6NGN9 336 aa20.84■□□□□ 0.93
COL9A2-211ENST00000496215 MAFKO60675 156 aa20.84■□□□□ 0.93
COL9A2-211ENST00000496215 EPHA8P29322 1005 aaPredicted RBP20.84■□□□□ 0.93
COL9A2-211ENST00000496215 HSPA9P38646 679 aaKnown RBP20.84■□□□□ 0.93
COL9A2-211ENST00000496215 CLDN2P57739 230 aa20.84■□□□□ 0.93
COL9A2-211ENST00000496215 AP1S1P61966 158 aa20.84■□□□□ 0.93
COL9A2-211ENST00000496215 NSUN2Q08J23 767 aaKnown RBP eCLIP20.84■□□□□ 0.93
COL9A2-211ENST00000496215 SLC10A7Q0GE19 358 aa20.84■□□□□ 0.93
COL9A2-211ENST00000496215 FGL2Q14314 439 aa20.84■□□□□ 0.93
COL9A2-211ENST00000496215 ANKRD20A8PQ5CZ79 823 aa20.84■□□□□ 0.93
COL9A2-211ENST00000496215 KYAT3Q6YP21 454 aaKnown RBP20.84■□□□□ 0.93
COL9A2-211ENST00000496215 PTAR1Q7Z6K3 402 aaPredicted RBP20.84■□□□□ 0.93
COL9A2-211ENST00000496215 GAS2L3Q86XJ1 694 aa20.84■□□□□ 0.93
COL9A2-211ENST00000496215 CAMK1DQ8IU85 385 aa20.84■□□□□ 0.93
COL9A2-211ENST00000496215 PAF1Q8N7H5 531 aa20.84■□□□□ 0.93
COL9A2-211ENST00000496215 DENND6BQ8NEG7 585 aa20.84■□□□□ 0.93
COL9A2-211ENST00000496215 OR13H1Q8NG92 308 aa20.84■□□□□ 0.93
COL9A2-211ENST00000496215 PCDH19Q8TAB3 1148 aa20.84■□□□□ 0.93
COL9A2-211ENST00000496215 FAM174AQ8TBP5 190 aa20.84■□□□□ 0.93
COL9A2-211ENST00000496215 RHBDD1Q8TEB9 315 aa20.84■□□□□ 0.93
COL9A2-211ENST00000496215 MUSKO15146 869 aa20.83■□□□□ 0.93
COL9A2-211ENST00000496215 PAK4O96013 591 aaPredicted RBP20.83■□□□□ 0.93
COL9A2-211ENST00000496215 TIMP2P16035 220 aa20.83■□□□□ 0.93
COL9A2-211ENST00000496215 CYLC1P35663 651 aaPredicted RBP20.83■□□□□ 0.93
COL9A2-211ENST00000496215 SCNN1BP51168 640 aa20.83■□□□□ 0.93
COL9A2-211ENST00000496215 BCL2L1Q07817 233 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms