RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 DCLK2Q8N568 766 aa7□□□□□ -1.29
USP39-219ENST00000496047 TTC9BQ8N6N2 239 aa7□□□□□ -1.29
USP39-219ENST00000496047 TTC8Q8TAM2 541 aa7□□□□□ -1.29
USP39-219ENST00000496047 GPR152Q8TDT2 470 aa7□□□□□ -1.29
USP39-219ENST00000496047 C10orf82Q8WW14 230 aa7□□□□□ -1.29
USP39-219ENST00000496047 ISL2Q96A47 359 aa7□□□□□ -1.29
USP39-219ENST00000496047 KLHL29Q96CT2 875 aa7□□□□□ -1.29
USP39-219ENST00000496047 ERP27Q96DN0 273 aa7□□□□□ -1.29
USP39-219ENST00000496047 HMCESQ96FZ2 354 aa7□□□□□ -1.29
USP39-219ENST00000496047 IMP4Q96G21 291 aaKnown RBP7□□□□□ -1.29
USP39-219ENST00000496047 OXNAD1Q96HP4 312 aaPredicted RBP7□□□□□ -1.29
USP39-219ENST00000496047 FEM1CQ96JP0 617 aa7□□□□□ -1.29
USP39-219ENST00000496047 SCYL1Q96KG9 808 aa7□□□□□ -1.29
USP39-219ENST00000496047 B3GALT6Q96L58 329 aa7□□□□□ -1.29
USP39-219ENST00000496047 NUDCD1Q96RS6 583 aa7□□□□□ -1.29
USP39-219ENST00000496047 APOL2Q9BQE5 337 aa7□□□□□ -1.29
USP39-219ENST00000496047 CWH43Q9H720 699 aa7□□□□□ -1.29
USP39-219ENST00000496047 CCSER2Q9H7U1 834 aa7□□□□□ -1.29
USP39-219ENST00000496047 ECT2Q9H8V3 914 aa7□□□□□ -1.29
USP39-219ENST00000496047 TRPC7Q9HCX4 862 aa7□□□□□ -1.29
USP39-219ENST00000496047 SMYD2Q9NRG4 433 aa7□□□□□ -1.29
USP39-219ENST00000496047 SNX15Q9NRS6 342 aa7□□□□□ -1.29
USP39-219ENST00000496047 ABCF3Q9NUQ8 709 aa7□□□□□ -1.29
USP39-219ENST00000496047 THAP1Q9NVV9 213 aa7□□□□□ -1.29
USP39-219ENST00000496047 PIH1D1Q9NWS0 290 aaKnown RBP7□□□□□ -1.29
USP39-219ENST00000496047 KCNK4Q9NYG8 393 aa7□□□□□ -1.29
USP39-219ENST00000496047 UBA2Q9UBT2 640 aaPredicted RBP7□□□□□ -1.29
USP39-219ENST00000496047 MYOFQ9NZM1 2061 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 A0A096LPK6 155 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 A0A0G2JND7 137 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 ZCWPW2A0A1B0GU75 182 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 CCDC195A0A1B0GUA6 201 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 ILVBLA1L0T0 632 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 TMEM114B3SHH9 223 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 ANKRD65E5RJM6 399 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 UGT1A9O60656 530 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 PLIN3O60664 434 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 PRAMEF11O60813 436 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 SOAT2O75908 522 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 PIAS1O75925 651 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 CRTAMO95727 393 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 FGF19O95750 216 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 MT-CYBP00156 380 aaPredicted RBP6.99□□□□□ -1.29
USP39-219ENST00000496047 C1QAP02745 245 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 MYL2P10916 166 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 STMN1P16949 149 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 PFKLP17858 780 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 NMBRP28336 390 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 CORO1AP31146 461 aaKnown RBP6.99□□□□□ -1.29
USP39-219ENST00000496047 CD86P42081 329 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 WNT3AP56704 352 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 GNA12Q03113 381 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 SF3A3Q12874 501 aaKnown RBP eCLIP6.99□□□□□ -1.29
USP39-219ENST00000496047 RAB33AQ14088 237 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 USP10Q14694 798 aaKnown RBP6.99□□□□□ -1.29
USP39-219ENST00000496047 C5orf22Q49AR2 442 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 FASTKD1Q53R41 847 aaKnown RBP6.99□□□□□ -1.29
USP39-219ENST00000496047 HSP90AA5PQ58FG0 334 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 RALGPS1Q5JS13 557 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 RASIP1Q5U651 963 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 ELMSAN1Q6PJG2 1045 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 CES3Q6UWW8 571 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 ARHGAP36Q6ZRI8 547 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 OTOP3Q7RTS5 596 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 GALNT7Q86SF2 657 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 C14orf80Q86SX3 495 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 TBC1D1Q86TI0 1168 aaPredicted RBP6.99□□□□□ -1.29
USP39-219ENST00000496047 DDX53Q86TM3 631 aaKnown RBP6.99□□□□□ -1.29
USP39-219ENST00000496047 CNTN4Q8IWV2 1026 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 RNF168Q8IYW5 571 aaPredicted RBP6.99□□□□□ -1.29
USP39-219ENST00000496047 CRIPAKQ8N1N5 446 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.99□□□□□ -1.29
USP39-219ENST00000496047 TEX26Q8N6G2 289 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 PAF1Q8N7H5 531 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 CNTD1Q8N815 330 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 HJURPQ8NCD3 748 aaPredicted RBP6.99□□□□□ -1.29
USP39-219ENST00000496047 SPATA22Q8NHS9 363 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 MRPS31Q92665 395 aaKnown RBP6.99□□□□□ -1.29
USP39-219ENST00000496047 INPP5DQ92835 1189 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 FOXJ1Q92949 421 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 TOP1MTQ969P6 601 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 PSMG2Q969U7 264 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.99□□□□□ -1.29
USP39-219ENST00000496047 CCDC126Q96EE4 140 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 MFSD3Q96ES6 412 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 ELMO2Q96JJ3 720 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 MYRFLQ96LU7 910 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 RILPQ96NA2 401 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 GPR22Q99680 433 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 GORASP1Q9BQQ3 440 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 MUC3BQ9H195 1237 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 UGT1A7Q9HAW7 530 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 UGT1A10Q9HAW8 530 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 UGT1A8Q9HAW9 530 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 ARNT2Q9HBZ2 717 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 ATP13A1Q9HD20 1204 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 SLCO1B3Q9NPD5 702 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 SAR1AQ9NR31 198 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 CHRAC1Q9NRG0 131 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 MRGBPQ9NV56 204 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms