RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 LEFTY1O75610 366 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 TJP3O95049 919 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 ATP1A1P05023 1023 aaKnown RBP12.05□□□□□ -0.48
APTX-233ENST00000496030 CEACAM1P13688 526 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 CCNB1P14635 433 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 CXCR5P32302 372 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 DRD3P35462 400 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 PSMD8P48556 350 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 SNRPD1P62314 119 aaKnown RBP12.05□□□□□ -0.48
APTX-233ENST00000496030 IFI35P80217 286 aaPredicted RBP12.05□□□□□ -0.48
APTX-233ENST00000496030 OTUD4Q01804 1114 aaKnown RBP12.05□□□□□ -0.48
APTX-233ENST00000496030 WASHC5Q12768 1159 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 ZBTB17Q13105 803 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 XRCC4Q13426 336 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 SIX1Q15475 284 aaPredicted RBP12.05□□□□□ -0.48
APTX-233ENST00000496030 MARC1Q5VT66 337 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 SRLQ86TD4 932 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 CACUL1Q86Y37 369 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 SLC13A5Q86YT5 568 aaPredicted RBP12.05□□□□□ -0.48
APTX-233ENST00000496030 PGBD3Q8N328 593 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 CCNYQ8ND76 341 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 DEFB124Q8NES8 71 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 PIP4K2CQ8TBX8 421 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 ARRDC3Q96B67 414 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 GDAP1L1Q96MZ0 367 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 FAM118BQ9BPY3 351 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 CPEB1Q9BZB8 566 aaKnown RBP12.05□□□□□ -0.48
APTX-233ENST00000496030 BRD8Q9H0E9 1235 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 C10orf88Q9H8K7 445 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 IL36AQ9UHA7 158 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 EVLQ9UI08 416 aaPredicted RBP12.05□□□□□ -0.48
APTX-233ENST00000496030 ATP8A1Q9Y2Q0 1164 aa12.05□□□□□ -0.48
APTX-233ENST00000496030 IGHV1OR15-9A0A0B4J2B8 117 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 KRIT1O00522 736 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 CDX4O14627 284 aaPredicted RBP12.04□□□□□ -0.48
APTX-233ENST00000496030 IL1BP01584 269 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 JCHAINP01591 159 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 CAPNS1P04632 268 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 CSRP1P21291 193 aaKnown RBP12.04□□□□□ -0.48
APTX-233ENST00000496030 C5AR1P21730 350 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 BCKDHBP21953 392 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 CETN2P41208 172 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 MMP13P45452 471 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 RECQLP46063 649 aaPredicted RBP12.04□□□□□ -0.48
APTX-233ENST00000496030 RENBPP51606 427 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 CREB5Q02930 508 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 USP39Q53GS9 565 aaKnown RBP12.04□□□□□ -0.48
APTX-233ENST00000496030 HS1BP3Q53T59 392 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 ALG1LQ6GMV1 187 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 TIGD7Q6NT04 549 aaPredicted RBP12.04□□□□□ -0.48
APTX-233ENST00000496030 USP30Q70CQ3 517 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 BZW1Q7L1Q6 419 aaKnown RBP12.04□□□□□ -0.48
APTX-233ENST00000496030 DSG4Q86SJ6 1040 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 ZC3H18Q86VM9 953 aaKnown RBP12.04□□□□□ -0.48
APTX-233ENST00000496030 SLC35B2Q8TB61 432 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 ARRDC2Q8TBH0 407 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 GRIN3AQ8TCU5 1115 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 LRIG1Q96JA1 1093 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 CCDC114Q96M63 670 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 BBC3Q96PG8 261 aaPredicted RBP12.04□□□□□ -0.48
APTX-233ENST00000496030 QKIQ96PU8 341 aaKnown RBP eCLIP12.04□□□□□ -0.48
APTX-233ENST00000496030 MGME1Q9BQP7 344 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 CINPQ9BW66 212 aaPredicted RBP12.04□□□□□ -0.48
APTX-233ENST00000496030 NEUROG2Q9H2A3 272 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 USP29Q9HBJ7 922 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 RBM22Q9NW64 420 aaKnown RBP eCLIP12.04□□□□□ -0.48
APTX-233ENST00000496030 WSB2Q9NYS7 404 aaPredicted RBP12.04□□□□□ -0.48
APTX-233ENST00000496030 SCML1Q9UN30 329 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 CYP8B1Q9UNU6 501 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 GPSM3Q9Y4H4 160 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 NEUROG3Q9Y4Z2 214 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 THADAQ6YHU6 1953 aa12.04□□□□□ -0.48
APTX-233ENST00000496030 ANKRD36A6QL64 1941 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 DOCK9Q9BZ29 2069 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 BCLAF3A2AJT9 711 aaKnown RBP12.03□□□□□ -0.48
APTX-233ENST00000496030 HACD1B0YJ81 288 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 PATE3B3GLJ2 98 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 PPP1R12AO14974 1030 aaPredicted RBP12.03□□□□□ -0.48
APTX-233ENST00000496030 ZBTB24O43167 697 aaPredicted RBP12.03□□□□□ -0.48
APTX-233ENST00000496030 RNASEH1O60930 286 aaKnown RBP12.03□□□□□ -0.48
APTX-233ENST00000496030 ZNF217O75362 1048 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 IGSF6O95976 241 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 ADH1BP00325 375 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 DNTTP04053 509 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 PRNPP04156 253 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 HLA-DQB2P05538 268 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 PTPN3P26045 913 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 ACSL1P33121 698 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 HSPA9P38646 679 aaKnown RBP12.03□□□□□ -0.48
APTX-233ENST00000496030 TAS2R38P59533 333 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 MAXP61244 160 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 GNG11P61952 73 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 NIPAL4Q0D2K0 466 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 AP1B1Q10567 949 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 CNTN1Q12860 1018 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 POM121L1PQ3SYA9 428 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 SLC45A4Q5BKX6 768 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 NCEH1Q6PIU2 408 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 PDZD3Q86UT5 571 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 ZSWIM9Q86XI8 627 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms