RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 TMEM11P17152 192 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 CHRNA5P30532 468 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 SOX2P48431 317 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 LIG4P49917 911 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 RAD23AP54725 363 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 CLDN2P57739 230 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 TAP1Q03518 808 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 OLIG2Q13516 323 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 COG2Q14746 738 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 PTPAQ15257 358 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 PLK5Q496M5 336 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 TCP11X2Q5H9J9 407 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 C9orf152Q5JTZ5 239 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 JADE1Q6IE81 842 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 LRRC8EQ6NSJ5 796 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 CLEC17AQ6ZS10 378 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 RHOUQ7L0Q8 258 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 PLPPR4Q7Z2D5 763 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 WDR5BQ86VZ2 330 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 CCDC25Q86WR0 208 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 FAM47BQ8NA70 645 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 Q8NFD4 153 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 ZFPM2Q8WW38 1151 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 NEU4Q8WWR8 484 aaPredicted RBP4.37□□□□□ -1.71
CMSS1-207ENST00000494412 PIGKQ92643 395 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 KAT2BQ92831 832 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 CAVIN3Q969G5 261 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 ARHGEF26Q96DR7 871 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 SIN3AQ96ST3 1273 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 IFIH1Q9BYX4 1025 aaKnown RBP4.37□□□□□ -1.71
CMSS1-207ENST00000494412 PLK3Q9H4B4 646 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 RANGRFQ9HD47 186 aaPredicted RBP4.37□□□□□ -1.71
CMSS1-207ENST00000494412 DECR2Q9NUI1 292 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 SH3BP4Q9P0V3 963 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 SEL1LQ9UBV2 794 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 CARD8Q9Y2G2 431 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 TESMINQ9Y4I5 508 aa4.37□□□□□ -1.71
CMSS1-207ENST00000494412 CYP2D7A0A087X1C5 515 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 A8MXE2 369 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 BTBD19C9JJ37 291 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 CHL1O00533 1208 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 RRHO14718 337 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 SEC14L5O43304 696 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 PSMD10O75832 226 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 MT-CYBP00156 380 aaPredicted RBP4.36□□□□□ -1.71
CMSS1-207ENST00000494412 ABCB1P08183 1280 aaPredicted RBP4.36□□□□□ -1.71
CMSS1-207ENST00000494412 SRPRAP08240 638 aaKnown RBP4.36□□□□□ -1.71
CMSS1-207ENST00000494412 QDPRP09417 244 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 MYBL1P10243 752 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 PTPN2P17706 415 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 ITGAXP20702 1163 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 YWHAQP27348 245 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 THPOP40225 353 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 MSH2P43246 934 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 HOXA4Q00056 320 aaPredicted RBP4.36□□□□□ -1.71
CMSS1-207ENST00000494412 ASIC2Q16515 512 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 ZXDCQ2QGD7 858 aaPredicted RBP4.36□□□□□ -1.71
CMSS1-207ENST00000494412 CXorf66Q5JRM2 361 aaPredicted RBP4.36□□□□□ -1.71
CMSS1-207ENST00000494412 VWA5B1Q5TIE3 1220 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 SHQ1Q6PI26 577 aaKnown RBP4.36□□□□□ -1.71
CMSS1-207ENST00000494412 RNF207Q6ZRF8 634 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 MFSD6Q6ZSS7 791 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 MRGPREQ86SM8 312 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 TBC1D26Q86UD7 250 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 IQCA1Q86XH1 822 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 THNSL1Q8IYQ7 743 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 OR8H3Q8N146 312 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 TDRD5Q8NAT2 981 aaKnown RBP4.36□□□□□ -1.71
CMSS1-207ENST00000494412 RASSF8Q8NHQ8 419 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 GOT1L1Q8NHS2 421 aaPredicted RBP4.36□□□□□ -1.71
CMSS1-207ENST00000494412 CACTINQ8WUQ7 758 aaKnown RBP4.36□□□□□ -1.71
CMSS1-207ENST00000494412 TMEM170AQ8WVE7 144 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 ATOH1Q92858 354 aaPredicted RBP4.36□□□□□ -1.71
CMSS1-207ENST00000494412 CCDC34Q96HJ3 373 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 FCRL5Q96RD9 977 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 CDK5RAP1Q96SZ6 601 aaKnown RBP4.36□□□□□ -1.71
CMSS1-207ENST00000494412 PAFAH2Q99487 392 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 GATA5Q9BWX5 397 aaPredicted RBP4.36□□□□□ -1.71
CMSS1-207ENST00000494412 HRH4Q9H3N8 390 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 HIPK3Q9H422 1215 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 PLEKHA4Q9H4M7 779 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 SETD4Q9NVD3 440 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 ARGLU1Q9NWB6 273 aaPredicted RBP4.36□□□□□ -1.71
CMSS1-207ENST00000494412 ARHGEF38Q9NXL2 777 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 WDR35Q9P2L0 1181 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 SEC63Q9UGP8 760 aaKnown RBP4.36□□□□□ -1.71
CMSS1-207ENST00000494412 IPO11Q9UI26 975 aaKnown RBP4.36□□□□□ -1.71
CMSS1-207ENST00000494412 ANAPC5Q9UJX4 755 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 PADI1Q9ULC6 663 aa4.36□□□□□ -1.71
CMSS1-207ENST00000494412 FAM237AA0A1B0GTK4 181 aa4.35□□□□□ -1.71
CMSS1-207ENST00000494412 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.35□□□□□ -1.71
CMSS1-207ENST00000494412 TYW5A2RUC4 315 aaKnown RBP4.35□□□□□ -1.71
CMSS1-207ENST00000494412 FAM157AC9JC47 383 aa4.35□□□□□ -1.71
CMSS1-207ENST00000494412 C1QTNF3-AMACRE9PGA6 284 aa4.35□□□□□ -1.71
CMSS1-207ENST00000494412 H7C1Q1 480 aa4.35□□□□□ -1.71
CMSS1-207ENST00000494412 TAF4O00268 1085 aa4.35□□□□□ -1.71
CMSS1-207ENST00000494412 DIAPH2O60879 1101 aa4.35□□□□□ -1.71
CMSS1-207ENST00000494412 HNRNPCP07910 306 aaKnown RBP eCLIP4.35□□□□□ -1.71
CMSS1-207ENST00000494412 HOXB5P09067 269 aa4.35□□□□□ -1.71
CMSS1-207ENST00000494412 CPT2P23786 658 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms