RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 HDDC3Q8N4P3 179 aa8.9□□□□□ -0.98
ITGB1-217ENST00000494395 PQLC3Q8N755 202 aa8.9□□□□□ -0.98
ITGB1-217ENST00000494395 SPC24Q8NBT2 197 aa8.9□□□□□ -0.98
ITGB1-217ENST00000494395 ACRBPQ8NEB7 543 aa8.9□□□□□ -0.98
ITGB1-217ENST00000494395 OR2T34Q8NGX1 318 aa8.9□□□□□ -0.98
ITGB1-217ENST00000494395 PCDH19Q8TAB3 1148 aa8.9□□□□□ -0.98
ITGB1-217ENST00000494395 GRIN3AQ8TCU5 1115 aa8.9□□□□□ -0.98
ITGB1-217ENST00000494395 ZDHHC1Q8WTX9 485 aa8.9□□□□□ -0.98
ITGB1-217ENST00000494395 RAPGEF5Q92565 580 aa8.9□□□□□ -0.98
ITGB1-217ENST00000494395 PIGKQ92643 395 aa8.9□□□□□ -0.98
ITGB1-217ENST00000494395 BIRC7Q96CA5 298 aa8.9□□□□□ -0.98
ITGB1-217ENST00000494395 INSM2Q96T92 566 aaPredicted RBP8.9□□□□□ -0.98
ITGB1-217ENST00000494395 BAG1Q99933 345 aaPredicted RBP8.9□□□□□ -0.98
ITGB1-217ENST00000494395 OMDQ99983 421 aa8.9□□□□□ -0.98
ITGB1-217ENST00000494395 HEPHQ9BQS7 1158 aa8.9□□□□□ -0.98
ITGB1-217ENST00000494395 LACRTQ9GZZ8 138 aa8.9□□□□□ -0.98
ITGB1-217ENST00000494395 SAP130Q9H0E3 1048 aa8.9□□□□□ -0.98
ITGB1-217ENST00000494395 EBF2Q9HAK2 575 aa8.9□□□□□ -0.98
ITGB1-217ENST00000494395 KLHL11Q9NVR0 708 aa8.9□□□□□ -0.98
ITGB1-217ENST00000494395 IL36AQ9UHA7 158 aa8.9□□□□□ -0.98
ITGB1-217ENST00000494395 NCKAP1Q9Y2A7 1128 aa8.9□□□□□ -0.98
ITGB1-217ENST00000494395 LRRK1Q38SD2 2015 aa8.9□□□□□ -0.99
ITGB1-217ENST00000494395 CEP250Q9BV73 2442 aa8.9□□□□□ -0.99
ITGB1-217ENST00000494395 TRPM6Q9BX84 2022 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 SERTM1A2A2V5 107 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 MEI4A8MW99 385 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 CDX4O14627 284 aaPredicted RBP8.89□□□□□ -0.99
ITGB1-217ENST00000494395 MUSKO15146 869 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 PJA2O43164 708 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 SPINT1O43278 529 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 FOXD2O60548 495 aaPredicted RBP8.89□□□□□ -0.99
ITGB1-217ENST00000494395 SERPINF2P08697 491 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 COMTP21964 271 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 KDELR1P24390 212 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 ITGB7P26010 798 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 MAOBP27338 520 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 GKP32189 559 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 SSR1P43307 286 aaKnown RBP8.89□□□□□ -0.99
ITGB1-217ENST00000494395 RECQLP46063 649 aaPredicted RBP8.89□□□□□ -0.99
ITGB1-217ENST00000494395 CCR5P51681 352 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 LIMK1P53667 647 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 SNRPD1P62314 119 aaKnown RBP8.89□□□□□ -0.99
ITGB1-217ENST00000494395 PPP2CBP62714 309 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 PPP2CAP67775 309 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 BNC1Q01954 994 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 LMNB2Q03252 620 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 SFSWAPQ12872 951 aaKnown RBP8.89□□□□□ -0.99
ITGB1-217ENST00000494395 KRT81Q14533 505 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 SPA17Q15506 151 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 TAZQ16635 292 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 DUOXA1Q1HG43 343 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 MYLK3Q32MK0 819 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 ANKRD20A8PQ5CZ79 823 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 TRIM61Q5EBN2 209 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 WDR45BQ5MNZ6 344 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 SYCP2LQ5T4T6 812 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 C11orf63Q6NUN7 778 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 C16orf46Q6P387 395 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.89□□□□□ -0.99
ITGB1-217ENST00000494395 PARS2Q7L3T8 475 aaKnown RBP8.89□□□□□ -0.99
ITGB1-217ENST00000494395 PLD5Q8N7P1 536 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 OR6K2Q8NGY2 324 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 NSMCE3Q96MG7 304 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 HDAC8Q9BY41 377 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 CPEB1Q9BZB8 566 aaKnown RBP8.89□□□□□ -0.99
ITGB1-217ENST00000494395 GOLPH3Q9H4A6 298 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 DLL3Q9NYJ7 618 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 HECAQ9UBI9 543 aaPredicted RBP8.89□□□□□ -0.99
ITGB1-217ENST00000494395 UBA2Q9UBT2 640 aaPredicted RBP8.89□□□□□ -0.99
ITGB1-217ENST00000494395 EIF2B4Q9UI10 523 aaKnown RBP8.89□□□□□ -0.99
ITGB1-217ENST00000494395 IPO11Q9UI26 975 aaKnown RBP8.89□□□□□ -0.99
ITGB1-217ENST00000494395 ZNF232Q9UNY5 417 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 HYOU1Q9Y4L1 999 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 ALG6Q9Y672 507 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 DUSP10Q9Y6W6 482 aa8.89□□□□□ -0.99
ITGB1-217ENST00000494395 ASCC3Q8N3C0 2202 aaKnown RBP8.88□□□□□ -0.99
ITGB1-217ENST00000494395 A0A0U1RQJ8 604 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 A0A1B0GTW7 788 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 A0A1W2PPC4 97 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 TSPAN11A1L157 253 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 FAM187AA6NFU0 413 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 LRRC72A6NJI9 287 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 PRR5-ARHGAP8B1AHC4 643 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 DFFAO00273 331 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 KPNA3O00505 521 aaPredicted RBP8.88□□□□□ -0.99
ITGB1-217ENST00000494395 INSIG1O15503 277 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 POP4O95707 220 aaKnown RBP8.88□□□□□ -0.99
ITGB1-217ENST00000494395 ADRB3P13945 408 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 CD27P26842 260 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 GPC1P35052 558 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 SERPINB6P35237 376 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 CSNK1DP48730 415 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 VAV2P52735 878 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 RHOAP61586 193 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 ARHGAP8P85298 464 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 GALNT2Q10471 571 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 SLC10A2Q12908 348 aaPredicted RBP8.88□□□□□ -0.99
ITGB1-217ENST00000494395 RFTN1Q14699 578 aaPredicted RBP8.88□□□□□ -0.99
ITGB1-217ENST00000494395 ZNF805Q5CZA5 627 aa8.88□□□□□ -0.99
ITGB1-217ENST00000494395 SLC9A4Q6AI14 798 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms