RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 SLC6A9P48067 706 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 MCM2P49736 904 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 DGKEP52429 567 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 MAP2K6P52564 334 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 LIMK1P53667 647 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 FAM193AP78312 1265 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 DUSP2Q05923 314 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 BFSP1Q12934 665 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 MORC3Q14149 939 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 TMEM132DQ14C87 1099 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 VEPH1Q14D04 833 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 ZC2HC1CQ53FD0 456 aaPredicted RBP5.5□□□□□ -1.53
PTCD3-219ENST00000494323 ADALQ6DHV7 355 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 SLC39A4Q6P5W5 647 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 GPBP1Q86WP2 473 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 METTL23Q86XA0 190 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 RPLP0P6Q8NHW5 317 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 LRRC15Q8TF66 581 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 CFHR4Q92496 578 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 NEIL1Q96FI4 390 aaPredicted RBP5.5□□□□□ -1.53
PTCD3-219ENST00000494323 CDK5RAP3Q96JB5 506 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 LOXL4Q96JB6 756 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 ZC3H10Q96K80 434 aaKnown RBP5.5□□□□□ -1.53
PTCD3-219ENST00000494323 GCNAQ96QF7 691 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 SLC22A12Q96S37 553 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 DMRTA2Q96SC8 542 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 P2RY13Q9BPV8 354 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 ARPC5LQ9BPX5 153 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 REEP2Q9BRK0 252 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 PI4K2AQ9BTU6 479 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 TIPINQ9BVW5 301 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 KRTAP9-3Q9BYQ3 159 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 MANSC1Q9H8J5 431 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 TDP1Q9NUW8 608 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 HSFX1Q9UBD0 423 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 CPSF3Q9UKF6 684 aaKnown RBP5.5□□□□□ -1.53
PTCD3-219ENST00000494323 SIK3Q9Y2K2 1263 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 FASNP49327 2511 aaKnown RBP5.5□□□□□ -1.53
PTCD3-219ENST00000494323 LAMA1P25391 3075 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 TCHHQ07283 1943 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 ASXL3Q9C0F0 2248 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 BCLAF3A2AJT9 711 aaKnown RBP5.49□□□□□ -1.53
PTCD3-219ENST00000494323 KPNA7A9QM74 516 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 PATE3B3GLJ2 98 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 H0YCG3 227 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 K7ENM7 598 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 LAD1O00515 517 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 RHOBTB1O94844 696 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 DRD1P21728 446 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 ACAT1P24752 427 aaKnown RBP5.49□□□□□ -1.53
PTCD3-219ENST00000494323 TAF6P49848 677 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 NOVA1P51513 510 aaKnown RBP5.49□□□□□ -1.53
PTCD3-219ENST00000494323 PER3P56645 1201 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 ADAM8P78325 824 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 IRX4P78413 519 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 HMGN5P82970 282 aaKnown RBP5.49□□□□□ -1.53
PTCD3-219ENST00000494323 SHC2P98077 582 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 DMC1Q14565 340 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 KYAT1Q16773 422 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 ANO6Q4KMQ2 910 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 HYIQ5T013 277 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 KRTAP5-3Q6L8H2 238 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 TOGARAM2Q6ZUX3 1019 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 Q6ZVL8 140 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 MON1AQ86VX9 555 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 TTC30AQ86WT1 665 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 CD302Q8IX05 232 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 DCP1BQ8IZD4 617 aaKnown RBP5.49□□□□□ -1.53
PTCD3-219ENST00000494323 CMTM4Q8IZR5 234 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 CCDC33Q8N5R6 958 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 FRMD1Q8N878 549 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 ARL14EPQ8N8R7 260 aaPredicted RBP5.49□□□□□ -1.53
PTCD3-219ENST00000494323 OR7D4Q8NG98 312 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 PARD3BQ8TEW8 1205 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 RLN3Q8WXF3 142 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 RGMAQ96B86 450 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 CYFIP2Q96F07 1278 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 RPL10LQ96L21 214 aaKnown RBP5.49□□□□□ -1.53
PTCD3-219ENST00000494323 ZSCAN31Q96LW9 406 aaPredicted RBP5.49□□□□□ -1.53
PTCD3-219ENST00000494323 LMF1Q96S06 567 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 TSPAN18Q96SJ8 248 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 ELAC2Q9BQ52 826 aaKnown RBP5.49□□□□□ -1.53
PTCD3-219ENST00000494323 TPSD1Q9BZJ3 242 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 C12orf65Q9H3J6 166 aaKnown RBP5.49□□□□□ -1.53
PTCD3-219ENST00000494323 ECT2Q9H8V3 914 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 TRPC7Q9HCX4 862 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 VPS45Q9NRW7 570 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 DUS2Q9NX74 493 aaKnown RBP5.49□□□□□ -1.53
PTCD3-219ENST00000494323 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.49□□□□□ -1.53
PTCD3-219ENST00000494323 GTF3C4Q9UKN8 822 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 OAZ3Q9UMX2 235 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 POLHQ9Y253 713 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 PCDHGB6Q9Y5F9 930 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 PCDHA13Q9Y5I0 950 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 WNT6Q9Y6F9 365 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 KNL1Q8NG31 2342 aa5.49□□□□□ -1.53
PTCD3-219ENST00000494323 NUP210Q8TEM1 1887 aaPredicted RBP5.49□□□□□ -1.53
PTCD3-219ENST00000494323 LRRC14BA6NHZ5 514 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 K7EQS6 105 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 MATN2O00339 956 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms