RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 IL36AQ9UHA7 158 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 NFU1Q9UMS0 254 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 CHKBQ9Y259 395 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 MRPS17Q9Y2R5 130 aaKnown RBP19.58■□□□□ 0.72
USP39-218ENST00000493829 FAM170BA6NMN3 283 aa19.57■□□□□ 0.72
USP39-218ENST00000493829 SYNCRIPO60506 623 aaKnown RBP19.57■□□□□ 0.72
USP39-218ENST00000493829 LEFTY1O75610 366 aa19.57■□□□□ 0.72
USP39-218ENST00000493829 CHRNB1P11230 501 aa19.57■□□□□ 0.72
USP39-218ENST00000493829 TPSB2P20231 275 aa19.57■□□□□ 0.72
USP39-218ENST00000493829 CSNK1DP48730 415 aa19.57■□□□□ 0.72
USP39-218ENST00000493829 MORF4L2Q15014 288 aa19.57■□□□□ 0.72
USP39-218ENST00000493829 TPSAB1Q15661 275 aa19.57■□□□□ 0.72
USP39-218ENST00000493829 ARSIQ5FYB1 569 aa19.57■□□□□ 0.72
USP39-218ENST00000493829 KIAA1211LQ6NV74 962 aa19.57■□□□□ 0.72
USP39-218ENST00000493829 LPCAT1Q8NF37 534 aa19.57■□□□□ 0.72
USP39-218ENST00000493829 OR52K1Q8NGK4 314 aa19.57■□□□□ 0.72
USP39-218ENST00000493829 TADA1Q96BN2 335 aa19.57■□□□□ 0.72
USP39-218ENST00000493829 PPP1R2P1Q96PQ5 205 aa19.57■□□□□ 0.72
USP39-218ENST00000493829 HEPHQ9BQS7 1158 aa19.57■□□□□ 0.72
USP39-218ENST00000493829 LMAN1LQ9HAT1 526 aa19.57■□□□□ 0.72
USP39-218ENST00000493829 EIF2B3Q9NR50 452 aaKnown RBP19.57■□□□□ 0.72
USP39-218ENST00000493829 SHOC2Q9UQ13 582 aa19.57■□□□□ 0.72
USP39-218ENST00000493829 WASF2Q9Y6W5 498 aa19.57■□□□□ 0.72
USP39-218ENST00000493829 POP4O95707 220 aaKnown RBP19.56■□□□□ 0.72
USP39-218ENST00000493829 MYBL2P10244 700 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 COL9A1P20849 921 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 SERPINA4P29622 427 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 MAPK8P45983 427 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 MRPS21P82921 87 aaKnown RBP19.56■□□□□ 0.72
USP39-218ENST00000493829 RAD51Q06609 339 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 ENPP2Q13822 863 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 TRMT11Q7Z4G4 463 aaKnown RBP19.56■□□□□ 0.72
USP39-218ENST00000493829 ZNF687Q8N1G0 1237 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 GPR161Q8N6U8 529 aaKnown RBP19.56■□□□□ 0.72
USP39-218ENST00000493829 FLCNQ8NFG4 579 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 OR8D1Q8WZ84 308 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 ART4Q93070 314 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 VOPP1Q96AW1 172 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 PARD6BQ9BYG5 372 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 VPS45Q9NRW7 570 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 SUN2Q9UH99 717 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.56■□□□□ 0.72
USP39-218ENST00000493829 NPC1O15118 1278 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 AVILO75366 819 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 PDHA1P08559 390 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 CES1P23141 567 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 ECHS1P30084 290 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 MAGEA6P43360 314 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 TNNT3P45378 269 aaPredicted RBP19.56■□□□□ 0.72
USP39-218ENST00000493829 PSMD8P48556 350 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 METAP1P53582 386 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 DRG2P55039 364 aaKnown RBP19.56■□□□□ 0.72
USP39-218ENST00000493829 CUL1Q13616 776 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 LRRC32Q14392 662 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 ELAVL3Q14576 367 aaKnown RBP19.56■□□□□ 0.72
USP39-218ENST00000493829 STARD3Q14849 445 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 CFAP58Q5T655 872 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 HOOK3Q86VS8 718 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 CCDC25Q86WR0 208 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 ZDHHC18Q9NUE0 388 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 PCDHB9Q9Y5E1 797 aa19.56■□□□□ 0.72
USP39-218ENST00000493829 ERI2A8K979 691 aaKnown RBP19.55■□□□□ 0.72
USP39-218ENST00000493829 KPNA3O00505 521 aaPredicted RBP19.55■□□□□ 0.72
USP39-218ENST00000493829 CTIFO43310 598 aaKnown RBP19.55■□□□□ 0.72
USP39-218ENST00000493829 BANF1O75531 89 aa19.55■□□□□ 0.72
USP39-218ENST00000493829 IL1BP01584 269 aa19.55■□□□□ 0.72
USP39-218ENST00000493829 CDK18Q07002 472 aa19.55■□□□□ 0.72
USP39-218ENST00000493829 E2F5Q15329 346 aa19.55■□□□□ 0.72
USP39-218ENST00000493829 RALGPS1Q5JS13 557 aa19.55■□□□□ 0.72
USP39-218ENST00000493829 LRRC73Q5JTD7 316 aa19.55■□□□□ 0.72
USP39-218ENST00000493829 DENND2CQ68D51 928 aa19.55■□□□□ 0.72
USP39-218ENST00000493829 NAPEPLDQ6IQ20 393 aa19.55■□□□□ 0.72
USP39-218ENST00000493829 GDPD4Q6W3E5 623 aa19.55■□□□□ 0.72
USP39-218ENST00000493829 ZNF534Q76KX8 674 aa19.55■□□□□ 0.72
USP39-218ENST00000493829 MMAAQ8IVH4 418 aaKnown RBP19.55■□□□□ 0.72
USP39-218ENST00000493829 KLHDC8BQ8IXV7 354 aa19.55■□□□□ 0.72
USP39-218ENST00000493829 DNAAF3Q8N9W5 541 aa19.55■□□□□ 0.72
USP39-218ENST00000493829 KLHL32Q96NJ5 620 aa19.55■□□□□ 0.72
USP39-218ENST00000493829 SERPINB12Q96P63 405 aa19.55■□□□□ 0.72
USP39-218ENST00000493829 SMIM14Q96QK8 99 aa19.55■□□□□ 0.72
USP39-218ENST00000493829 TUBGCP5Q96RT8 1024 aa19.55■□□□□ 0.72
USP39-218ENST00000493829 GABRG3Q99928 467 aa19.55■□□□□ 0.72
USP39-218ENST00000493829 SLC6A17Q9H1V8 727 aa19.55■□□□□ 0.72
USP39-218ENST00000493829 MFSD1Q9H3U5 465 aa19.55■□□□□ 0.72
USP39-218ENST00000493829 SARDHQ9UL12 918 aa19.55■□□□□ 0.72
USP39-218ENST00000493829 CKAP5Q14008 2032 aa19.54■□□□□ 0.72
USP39-218ENST00000493829 PSMD3O43242 534 aa19.54■□□□□ 0.72
USP39-218ENST00000493829 SUN1O94901 812 aa19.54■□□□□ 0.72
USP39-218ENST00000493829 PRKCGP05129 697 aa19.54■□□□□ 0.72
USP39-218ENST00000493829 PIRTP0C851 137 aa19.54■□□□□ 0.72
USP39-218ENST00000493829 TPH1P17752 444 aa19.54■□□□□ 0.72
USP39-218ENST00000493829 CA4P22748 312 aa19.54■□□□□ 0.72
USP39-218ENST00000493829 ADRA1AP35348 466 aa19.54■□□□□ 0.72
USP39-218ENST00000493829 SESN2P58004 480 aaPredicted RBP19.54■□□□□ 0.72
USP39-218ENST00000493829 SIRPB2Q5JXA9 342 aa19.54■□□□□ 0.72
USP39-218ENST00000493829 HP1BP3Q5SSJ5 553 aaPredicted RBP19.54■□□□□ 0.72
USP39-218ENST00000493829 ZSWIM9Q86XI8 627 aa19.54■□□□□ 0.72
USP39-218ENST00000493829 PLPP6Q8IY26 295 aa19.54■□□□□ 0.72
USP39-218ENST00000493829 KCNV2Q8TDN2 545 aa19.54■□□□□ 0.72
USP39-218ENST00000493829 RMDN1Q96DB5 314 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms