RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 DMTF1Q9Y222 760 aa20.27■□□□□ 0.84
RNF40-203ENST00000493683 MANSC4A6NHS7 340 aaPredicted RBP20.27■□□□□ 0.84
RNF40-203ENST00000493683 USP12O75317 370 aa20.27■□□□□ 0.84
RNF40-203ENST00000493683 RAB25P57735 213 aa20.27■□□□□ 0.84
RNF40-203ENST00000493683 BMT2Q1RMZ1 405 aa20.27■□□□□ 0.84
RNF40-203ENST00000493683 ZYG11BQ9C0D3 744 aa20.27■□□□□ 0.84
RNF40-203ENST00000493683 MUC13Q9H3R2 512 aa20.27■□□□□ 0.84
RNF40-203ENST00000493683 EPB41L1Q9H4G0 881 aa20.27■□□□□ 0.84
RNF40-203ENST00000493683 SLC9A8Q9Y2E8 581 aa20.27■□□□□ 0.84
RNF40-203ENST00000493683 ASTN1O14525 1302 aa20.27■□□□□ 0.84
RNF40-203ENST00000493683 DHRS12A0PJE2 317 aa20.27■□□□□ 0.84
RNF40-203ENST00000493683 HIST1H2ABP04908 130 aa20.27■□□□□ 0.84
RNF40-203ENST00000493683 C9orf131Q5VYM1 1079 aa20.27■□□□□ 0.84
RNF40-203ENST00000493683 HIST3H2AQ7L7L0 130 aa20.27■□□□□ 0.84
RNF40-203ENST00000493683 PIK3R5Q8WYR1 880 aa20.27■□□□□ 0.84
RNF40-203ENST00000493683 HIST1H2ACQ93077 130 aa20.27■□□□□ 0.84
RNF40-203ENST00000493683 FGFR3P22607 806 aa20.27■□□□□ 0.83
RNF40-203ENST00000493683 GLRA2P23416 452 aa20.27■□□□□ 0.83
RNF40-203ENST00000493683 UGT2B15P54855 530 aa20.27■□□□□ 0.83
RNF40-203ENST00000493683 POTEHQ6S545 545 aa20.27■□□□□ 0.83
RNF40-203ENST00000493683 ANKRD52Q8NB46 1076 aa20.27■□□□□ 0.83
RNF40-203ENST00000493683 ITCHQ96J02 903 aa20.27■□□□□ 0.83
RNF40-203ENST00000493683 PLEKHG4BQ96PX9 1271 aa20.27■□□□□ 0.83
RNF40-203ENST00000493683 HAT1O14929 419 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 CAPN1P07384 714 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 NFKB1P19838 968 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 BDNFP23560 247 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 OLR1P78380 273 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 CREMQ03060 361 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 DMPKQ09013 629 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 SPESP1Q6UW49 350 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 ING4Q9UNL4 249 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 CCDC162PA2VCL2 907 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 FGRP09769 529 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 MARSP56192 900 aaKnown RBP20.26■□□□□ 0.83
RNF40-203ENST00000493683 NBPF12Q5TAG4 269 aaPredicted RBP20.26■□□□□ 0.83
RNF40-203ENST00000493683 DENND5AQ6IQ26 1287 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 GALNT18Q6P9A2 607 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 MTFR1LQ9H019 292 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 EDF1O60869 148 aaKnown RBP20.26■□□□□ 0.83
RNF40-203ENST00000493683 KRT36O76013 467 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 RECQL4O94761 1208 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 ENO2P09104 434 aaPredicted RBP20.26■□□□□ 0.83
RNF40-203ENST00000493683 CD86P42081 329 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 RNASE11Q8TAA1 199 aaKnown RBP20.26■□□□□ 0.83
RNF40-203ENST00000493683 PHF10Q8WUB8 498 aaKnown RBP20.26■□□□□ 0.83
RNF40-203ENST00000493683 CDH19Q9H159 772 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 DHX33Q9H6R0 707 aaKnown RBP20.26■□□□□ 0.83
RNF40-203ENST00000493683 ASB8Q9H765 288 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 PEX11AO75192 247 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 AGMOQ6ZNB7 445 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 KCNK18Q7Z418 384 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 ZBTB45Q96K62 511 aaPredicted RBP20.26■□□□□ 0.83
RNF40-203ENST00000493683 TEFMQ96QE5 360 aaKnown RBP20.26■□□□□ 0.83
RNF40-203ENST00000493683 SLC4A5Q9BY07 1137 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 ZNF446Q9NWS9 450 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 TAS2R14Q9NYV8 317 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 RAPGEFL1Q9UHV5 662 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 PTCH2Q9Y6C5 1203 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 PPRC1Q5VV67 1664 aaKnown RBP20.26■□□□□ 0.83
RNF40-203ENST00000493683 GSAPA4D1B5 854 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 KLRC4O43908 158 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 CASP7P55210 303 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 FMO1Q01740 532 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 TAF13Q15543 124 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 ALG11Q2TAA5 492 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 TRIM40Q6P9F5 258 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 CXXC5Q7LFL8 322 aaKnown RBP20.26■□□□□ 0.83
RNF40-203ENST00000493683 CAMKK1Q8N5S9 505 aa20.26■□□□□ 0.83
RNF40-203ENST00000493683 AZIN1O14977 448 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 NUDT14O95848 222 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 PCSK2P16519 638 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 TBC1D21Q8IYX1 336 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 ADCY4Q8NFM4 1077 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 ELMO1Q92556 727 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 FBXO6Q9NRD1 293 aaPredicted RBP20.25■□□□□ 0.83
RNF40-203ENST00000493683 DNMT3LQ9UJW3 386 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 COG5Q9UP83 839 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 EFR3BQ9Y2G0 817 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.25■□□□□ 0.83
RNF40-203ENST00000493683 SPTLC1O15269 473 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 CST1P01037 141 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 ARHGAP36Q6ZRI8 547 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 GPR180Q86V85 440 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 URADA6NGE7 173 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 CSDE1O75534 798 aaKnown RBP20.25■□□□□ 0.83
RNF40-203ENST00000493683 SERPINB7O75635 380 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 AMHP03971 560 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 PRG2P13727 222 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 HGFP14210 728 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 MYL9P24844 172 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 KCNJ2P63252 427 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 LSM12Q3MHD2 195 aaKnown RBP20.25■□□□□ 0.83
RNF40-203ENST00000493683 TRABD2AQ86V40 505 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 SMYD1Q8NB12 490 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 ATP13A3Q9H7F0 1226 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 ROBO3Q96MS0 1386 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 BCAP31P51572 246 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 PSMD5Q16401 504 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 C15orf59Q2T9L4 293 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms