RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 MTM1Q13496 603 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 SLC29A2Q14542 456 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 SLC1A5Q15758 541 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 ATXN7L2Q5T6C5 722 aaPredicted RBP12.79□□□□□ -0.36
VPS52-220ENST00000493674 DENND2CQ68D51 928 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 ANKMY2Q8IV38 441 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.79□□□□□ -0.36
VPS52-220ENST00000493674 PYROXD1Q8WU10 500 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 FRS2Q8WU20 508 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 SPOCK2Q92563 424 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 RPL10LQ96L21 214 aaKnown RBP12.79□□□□□ -0.36
VPS52-220ENST00000493674 RANBP9Q96S59 729 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 SH3GL2Q99962 352 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 NAT9Q9BTE0 207 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 FSD1LQ9BXM9 530 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 IL22Q9GZX6 179 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 MRM3Q9HC36 420 aaKnown RBP12.79□□□□□ -0.36
VPS52-220ENST00000493674 SCUBE2Q9NQ36 999 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 FAM53CQ9NYF3 392 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 ARIH1Q9Y4X5 557 aaPredicted RBP12.79□□□□□ -0.36
VPS52-220ENST00000493674 DOCK9Q9BZ29 2069 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 WASH3PC4AMC7 463 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 HTRA2O43464 458 aaPredicted RBP12.78□□□□□ -0.36
VPS52-220ENST00000493674 TCEA3O75764 348 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 ACSL3O95573 720 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 NDST3O95803 873 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 CPP00450 1065 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 SHBGP04278 402 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 FGF1P05230 155 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 PGAM1P18669 254 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 CHRNA4P43681 627 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 SCNN1BP51168 640 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 EIF3BP55884 814 aaKnown RBP12.78□□□□□ -0.36
VPS52-220ENST00000493674 SESN2P58004 480 aaPredicted RBP12.78□□□□□ -0.36
VPS52-220ENST00000493674 CDK18Q07002 472 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 TRAF2Q12933 501 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 FRG1Q14331 258 aaKnown RBP12.78□□□□□ -0.36
VPS52-220ENST00000493674 SIRPB2Q5JXA9 342 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 HP1BP3Q5SSJ5 553 aaPredicted RBP12.78□□□□□ -0.36
VPS52-220ENST00000493674 NAIF1Q69YI7 327 aaPredicted RBP12.78□□□□□ -0.36
VPS52-220ENST00000493674 UNC5AQ6ZN44 842 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 CYS1Q717R9 158 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 TMEM135Q86UB9 458 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 CCNJLQ8IV13 435 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 PLCD3Q8N3E9 789 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 OR2AP1Q8NGE2 309 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 PTCD2Q8WV60 388 aaKnown RBP12.78□□□□□ -0.36
VPS52-220ENST00000493674 DNASE1L2Q92874 299 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 STAMBPL1Q96FJ0 436 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 APOL2Q9BQE5 337 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 KIFC1Q9BW19 673 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 CPEB1Q9BZB8 566 aaKnown RBP12.78□□□□□ -0.36
VPS52-220ENST00000493674 BRD9Q9H8M2 597 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 PIH1D1Q9NWS0 290 aaKnown RBP12.78□□□□□ -0.36
VPS52-220ENST00000493674 ELOVL2Q9NXB9 296 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 BFARQ9NZS9 450 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 SLCO3A1Q9UIG8 710 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 HCN2Q9UL51 889 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 SOX13Q9UN79 622 aa12.78□□□□□ -0.36
VPS52-220ENST00000493674 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.78□□□□□ -0.36
VPS52-220ENST00000493674 A0A087WUV0 522 aaPredicted RBP12.77□□□□□ -0.37
VPS52-220ENST00000493674 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.77□□□□□ -0.37
VPS52-220ENST00000493674 FAM237BA0A1B0GVD1 139 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 TRAFD1O14545 582 aaPredicted RBP12.77□□□□□ -0.37
VPS52-220ENST00000493674 TIMM44O43615 452 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 SOCS5O75159 536 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 ALDH1A2O94788 518 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 ATP5BP06576 529 aaKnown RBP12.77□□□□□ -0.37
VPS52-220ENST00000493674 ALADP13716 330 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 IL9P15248 144 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 SP100P23497 879 aaPredicted RBP12.77□□□□□ -0.37
VPS52-220ENST00000493674 SSTR1P30872 391 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 SNRPD1P62314 119 aaKnown RBP12.77□□□□□ -0.37
VPS52-220ENST00000493674 CRADDP78560 199 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 KDSRQ06136 332 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 ZNF844Q08AG5 666 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 DLG2Q15700 870 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 PCSK7Q16549 785 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 CERCAMQ5T4B2 595 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 RNF135Q8IUD6 432 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 ADHFE1Q8IWW8 467 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 SUGP1Q8IWZ8 645 aaKnown RBP12.77□□□□□ -0.37
VPS52-220ENST00000493674 CYB5D2Q8WUJ1 264 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 SORCS1Q8WY21 1168 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 ECHDC3Q96DC8 303 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 TUBGCP5Q96RT8 1024 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 UHRF1Q96T88 793 aaPredicted RBP12.77□□□□□ -0.37
VPS52-220ENST00000493674 TM6SF2Q9BZW4 377 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 ACSS3Q9H6R3 686 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 KCNK12Q9HB15 430 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 EURLQ9NYK6 297 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 FETUBQ9UGM5 382 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 ZC3H7BQ9UGR2 993 aaKnown RBP12.77□□□□□ -0.37
VPS52-220ENST00000493674 RABGEF1Q9UJ41 708 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 STARD13Q9Y3M8 1113 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 TCAF1Q9Y4C2 921 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 RAI2Q9Y5P3 530 aa12.77□□□□□ -0.37
VPS52-220ENST00000493674 TCRBV9S1A1TA0A576 114 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 MAGEB16A2A368 324 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 USP1O94782 785 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms