RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 PAK4O96013 591 aaPredicted RBP24.96■■□□□ 1.59
UPF3A-209ENST00000492270 THEGLP0DJG4 465 aa24.96■■□□□ 1.59
UPF3A-209ENST00000492270 TIMP2P16035 220 aa24.96■■□□□ 1.59
UPF3A-209ENST00000492270 AKT2P31751 481 aa24.96■■□□□ 1.59
UPF3A-209ENST00000492270 SLC10A7Q0GE19 358 aa24.96■■□□□ 1.59
UPF3A-209ENST00000492270 HNRNPDQ14103 355 aaKnown RBP24.96■■□□□ 1.59
UPF3A-209ENST00000492270 DPYSL3Q14195 570 aa24.96■■□□□ 1.59
UPF3A-209ENST00000492270 MESDQ14696 234 aa24.96■■□□□ 1.59
UPF3A-209ENST00000492270 SUZ12Q15022 739 aaKnown RBP24.96■■□□□ 1.59
UPF3A-209ENST00000492270 GAS2L3Q86XJ1 694 aa24.96■■□□□ 1.59
UPF3A-209ENST00000492270 OR13H1Q8NG92 308 aa24.96■■□□□ 1.59
UPF3A-209ENST00000492270 SLC35G2Q8TBE7 412 aa24.96■■□□□ 1.59
UPF3A-209ENST00000492270 RHBDD1Q8TEB9 315 aa24.96■■□□□ 1.59
UPF3A-209ENST00000492270 KLHDC7BQ96G42 594 aa24.96■■□□□ 1.59
UPF3A-209ENST00000492270 DKK3Q9UBP4 350 aa24.96■■□□□ 1.59
UPF3A-209ENST00000492270 WASF3Q9UPY6 502 aa24.96■■□□□ 1.59
UPF3A-209ENST00000492270 CHD8Q9HCK8 2581 aa24.96■■□□□ 1.59
UPF3A-209ENST00000492270 SRLQ86TD4 932 aa24.95■■□□□ 1.58
UPF3A-209ENST00000492270 ZSWIM9Q86XI8 627 aa24.95■■□□□ 1.58
UPF3A-209ENST00000492270 CAMK1DQ8IU85 385 aa24.95■■□□□ 1.58
UPF3A-209ENST00000492270 NSMCE3Q96MG7 304 aa24.95■■□□□ 1.58
UPF3A-209ENST00000492270 CNTNAP3BQ96NU0 1288 aa24.95■■□□□ 1.58
UPF3A-209ENST00000492270 CALN1Q9BXU9 219 aa24.95■■□□□ 1.58
UPF3A-209ENST00000492270 CNTNAP3Q9BZ76 1288 aa24.95■■□□□ 1.58
UPF3A-209ENST00000492270 SUV39H2Q9H5I1 410 aa24.95■■□□□ 1.58
UPF3A-209ENST00000492270 CAAP1Q9H8G2 361 aa24.95■■□□□ 1.58
UPF3A-209ENST00000492270 RCOR3Q9P2K3 495 aaPredicted RBP24.95■■□□□ 1.58
UPF3A-209ENST00000492270 TTC24A2A3L6 582 aaPredicted RBP24.94■■□□□ 1.58
UPF3A-209ENST00000492270 MFSD11O43934 449 aa24.94■■□□□ 1.58
UPF3A-209ENST00000492270 PEX11BO96011 259 aa24.94■■□□□ 1.58
UPF3A-209ENST00000492270 EPHA8P29322 1005 aaPredicted RBP24.94■■□□□ 1.58
UPF3A-209ENST00000492270 MAN1A1P33908 653 aa24.94■■□□□ 1.58
UPF3A-209ENST00000492270 ZNF75DP51815 510 aa24.94■■□□□ 1.58
UPF3A-209ENST00000492270 SHC2P98077 582 aa24.94■■□□□ 1.58
UPF3A-209ENST00000492270 OVGP1Q12889 678 aa24.94■■□□□ 1.58
UPF3A-209ENST00000492270 BNIP3Q12983 259 aa24.94■■□□□ 1.58
UPF3A-209ENST00000492270 RFTN1Q14699 578 aaPredicted RBP24.94■■□□□ 1.58
UPF3A-209ENST00000492270 LBRQ14739 615 aaKnown RBP24.94■■□□□ 1.58
UPF3A-209ENST00000492270 TMCO4Q5TGY1 634 aa24.94■■□□□ 1.58
UPF3A-209ENST00000492270 KDM7AQ6ZMT4 941 aa24.94■■□□□ 1.58
UPF3A-209ENST00000492270 SAP25Q8TEE9 199 aa24.94■■□□□ 1.58
UPF3A-209ENST00000492270 C1QTNF2Q9BXJ5 285 aa24.94■■□□□ 1.58
UPF3A-209ENST00000492270 ERVMER34-1Q9H9K5 563 aa24.94■■□□□ 1.58
UPF3A-209ENST00000492270 ARID1BQ8NFD5 2236 aaPredicted RBP24.94■■□□□ 1.58
UPF3A-209ENST00000492270 AKAP13Q12802 2813 aa24.93■■□□□ 1.58
UPF3A-209ENST00000492270 TSPAN11A1L157 253 aa24.93■■□□□ 1.58
UPF3A-209ENST00000492270 POM121BA6NF01 834 aa24.93■■□□□ 1.58
UPF3A-209ENST00000492270 MAFKO60675 156 aa24.93■■□□□ 1.58
UPF3A-209ENST00000492270 MAGEC1O60732 1142 aa24.93■■□□□ 1.58
UPF3A-209ENST00000492270 MMP20O60882 483 aa24.93■■□□□ 1.58
UPF3A-209ENST00000492270 FTH1P19P0C7X4 201 aa24.93■■□□□ 1.58
UPF3A-209ENST00000492270 SERPINB6P35237 376 aa24.93■■□□□ 1.58
UPF3A-209ENST00000492270 GRK6P43250 576 aa24.93■■□□□ 1.58
UPF3A-209ENST00000492270 CSNK1DP48730 415 aa24.93■■□□□ 1.58
UPF3A-209ENST00000492270 NCBP2-AS2Q69YL0 99 aa24.93■■□□□ 1.58
UPF3A-209ENST00000492270 ABI3BPQ7Z7G0 1075 aa24.93■■□□□ 1.58
UPF3A-209ENST00000492270 SLC22A18ASQ8N1D0 253 aa24.93■■□□□ 1.58
UPF3A-209ENST00000492270 ATPAF2Q8N5M1 289 aa24.93■■□□□ 1.58
UPF3A-209ENST00000492270 PNPLA1Q8N8W4 532 aa24.93■■□□□ 1.58
UPF3A-209ENST00000492270 KCTD6Q8NC69 237 aa24.93■■□□□ 1.58
UPF3A-209ENST00000492270 PCDH19Q8TAB3 1148 aa24.93■■□□□ 1.58
UPF3A-209ENST00000492270 BMFQ96LC9 184 aa24.93■■□□□ 1.58
UPF3A-209ENST00000492270 ZNF599Q96NL3 588 aa24.93■■□□□ 1.58
UPF3A-209ENST00000492270 PSKH2Q96QS6 385 aa24.93■■□□□ 1.58
UPF3A-209ENST00000492270 KLF6Q99612 283 aaPredicted RBP24.93■■□□□ 1.58
UPF3A-209ENST00000492270 WRAP53Q9BUR4 548 aaKnown RBP24.93■■□□□ 1.58
UPF3A-209ENST00000492270 CEP295Q9C0D2 2601 aa24.93■■□□□ 1.58
UPF3A-209ENST00000492270 HYAL3O43820 417 aaPredicted RBP24.92■■□□□ 1.58
UPF3A-209ENST00000492270 PRKCGP05129 697 aa24.92■■□□□ 1.58
UPF3A-209ENST00000492270 ARRB1P49407 418 aaPredicted RBP24.92■■□□□ 1.58
UPF3A-209ENST00000492270 SEMG2Q02383 582 aa24.92■■□□□ 1.58
UPF3A-209ENST00000492270 SGCGQ13326 291 aa24.92■■□□□ 1.58
UPF3A-209ENST00000492270 GRM3Q14832 879 aa24.92■■□□□ 1.58
UPF3A-209ENST00000492270 ANKRD20A8PQ5CZ79 823 aa24.92■■□□□ 1.58
UPF3A-209ENST00000492270 PTAR1Q7Z6K3 402 aaPredicted RBP24.92■■□□□ 1.58
UPF3A-209ENST00000492270 GLRX5Q86SX6 157 aa24.92■■□□□ 1.58
UPF3A-209ENST00000492270 SLCO6A1Q86UG4 719 aa24.92■■□□□ 1.58
UPF3A-209ENST00000492270 PGBD5Q8N414 524 aa24.92■■□□□ 1.58
UPF3A-209ENST00000492270 RFFLQ8WZ73 363 aa24.92■■□□□ 1.58
UPF3A-209ENST00000492270 TUBGCP5Q96RT8 1024 aa24.92■■□□□ 1.58
UPF3A-209ENST00000492270 ATP13A3Q9H7F0 1226 aa24.92■■□□□ 1.58
UPF3A-209ENST00000492270 SEPT3Q9UH03 358 aa24.92■■□□□ 1.58
UPF3A-209ENST00000492270 LCMT1Q9UIC8 334 aa24.92■■□□□ 1.58
UPF3A-209ENST00000492270 A6NNZ2 444 aa24.91■■□□□ 1.58
UPF3A-209ENST00000492270 SDC3O75056 442 aa24.91■■□□□ 1.58
UPF3A-209ENST00000492270 MTA2O94776 668 aa24.91■■□□□ 1.58
UPF3A-209ENST00000492270 MAP3K6O95382 1288 aa24.91■■□□□ 1.58
UPF3A-209ENST00000492270 ITGAVP06756 1048 aa24.91■■□□□ 1.58
UPF3A-209ENST00000492270 KRT7P08729 469 aa24.91■■□□□ 1.58
UPF3A-209ENST00000492270 XPAP23025 273 aaPredicted RBP24.91■■□□□ 1.58
UPF3A-209ENST00000492270 RXRGP48443 463 aa24.91■■□□□ 1.58
UPF3A-209ENST00000492270 SCNN1BP51168 640 aa24.91■■□□□ 1.58
UPF3A-209ENST00000492270 ZNF235Q14590 738 aa24.91■■□□□ 1.58
UPF3A-209ENST00000492270 PDK2Q15119 407 aa24.91■■□□□ 1.58
UPF3A-209ENST00000492270 UGP2Q16851 508 aa24.91■■□□□ 1.58
UPF3A-209ENST00000492270 Q6ZSR6 202 aa24.91■■□□□ 1.58
UPF3A-209ENST00000492270 RHOT2Q8IXI1 618 aa24.91■■□□□ 1.58
UPF3A-209ENST00000492270 OXR1Q8N573 874 aa24.91■■□□□ 1.58
UPF3A-209ENST00000492270 CXorf40AQ8TE69 158 aa24.91■■□□□ 1.58
UPF3A-209ENST00000492270 ZNF641Q96N77 438 aaPredicted RBP24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms