RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 C16orf96A6NNT2 1141 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 TMEM110-MUSTN1A8MSY1 372 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 KRIT1O00522 736 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 AREL1O15033 823 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 INSIG1O15503 277 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 BUB1O43683 1085 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 AP1G1O43747 822 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 SDC3O75056 442 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 UGT2B4P06133 528 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 THEGLP0DJG4 465 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 TCF4P15884 667 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 ITIH2P19823 946 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 MIPP30301 263 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 SSR1P43307 286 aaKnown RBP12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 ARRB1P49407 418 aaPredicted RBP12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 YBEYP58557 167 aaPredicted RBP12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 DNAJC3Q13217 504 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 CYTH1Q15438 398 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 SLC45A4Q5BKX6 768 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 ZNF805Q5CZA5 627 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 TPRG1LQ5T0D9 272 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 AFMIDQ63HM1 303 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 EID2Q8N6I1 236 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 TSC1Q92574 1164 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 KLHDC7BQ96G42 594 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 PPP1R16AQ96I34 528 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 BMFQ96LC9 184 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 KCTD15Q96SI1 283 aaPredicted RBP12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 KLF6Q99612 283 aaPredicted RBP12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 EPAS1Q99814 870 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 SNRNP25Q9BV90 132 aaKnown RBP12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 SLC17A9Q9BYT1 436 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 TSGA10Q9BZW7 698 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 KCNF1Q9H3M0 494 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 LHX3Q9UBR4 397 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 FTSJ1Q9UET6 329 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 PCSK1NQ9UHG2 260 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 IP6K2Q9UHH9 426 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 LCMT1Q9UIC8 334 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 HPCAL4Q9UM19 191 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 TFR2Q9UP52 801 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 AP4E1Q9UPM8 1137 aa12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 REXO2Q9Y3B8 237 aaKnown RBP12.87□□□□□ -0.35
SEC61A1-206ENST00000491668 TMEM8BA6NDV4 472 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 POM121BA6NF01 834 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 J3KR12 359 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 TRIM38O00635 465 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 ZSCAN12O43309 604 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 KRT86O43790 486 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 LRCH4O75427 683 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 POP4O95707 220 aaKnown RBP12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 PAK4O96013 591 aaPredicted RBP12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 ITGAVP06756 1048 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 GIMD1P0DJR0 217 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 HNRNPA2B1P22626 353 aaKnown RBP12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 CLDN6P56747 220 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 GEMIN4P57678 1058 aaKnown RBP12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 CCDC15Q0P6D6 951 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 PIGHQ14442 188 aaPredicted RBP12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 MESDQ14696 234 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 IFI16Q16666 785 aaKnown RBP12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 PARP15Q460N3 678 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 INO80DQ53TQ3 878 aaPredicted RBP12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 LRRC73Q5JTD7 316 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 FBXL19Q6PCT2 694 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 ARHGAP12Q8IWW6 846 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 TP53INP2Q8IXH6 220 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 RYBPQ8N488 228 aaPredicted RBP12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 NPWQ8N729 165 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 FNIP1Q8TF40 1166 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 ZCCHC14Q8WYQ9 949 aaKnown RBP12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 CELF6Q96J87 481 aaKnown RBP12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 LRIG1Q96JA1 1093 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 BTBD6Q96KE9 485 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 KLHL32Q96NJ5 620 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 NCAPGQ9BPX3 1015 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 C1QTNF2Q9BXJ5 285 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 SLC39A8Q9C0K1 460 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 DHX35Q9H5Z1 703 aaKnown RBP12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 CATSPERBQ9H7T0 1116 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 UCKL1Q9NWZ5 548 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 MFHAS1Q9Y4C4 1052 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 KNTC1P50748 2209 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 FAM208BQ5VWN6 2430 aa12.86□□□□□ -0.35
SEC61A1-206ENST00000491668 ACACAQ13085 2346 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 A0A0A6YYK5 440 aaPredicted RBP12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 MACROD2A1Z1Q3 448 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 FAM149AA5PLN7 773 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 RCCD1A6NED2 376 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 ZSCAN5CA6NGD5 496 aaPredicted RBP12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 IGLON5A6NGN9 336 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 SRRM3A6NNA2 597 aaPredicted RBP12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 ENC1O14682 589 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 YKT6O15498 198 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 FGF10O15520 208 aaPredicted RBP12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 PRAMEF11O60813 436 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 TIMP2P16035 220 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 IL1R2P27930 398 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 AKT2P31751 481 aa12.85□□□□□ -0.35
SEC61A1-206ENST00000491668 RGRP47804 291 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms