RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 ITIH1P19827 911 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 EIF4A3P38919 411 aaKnown RBP13.41□□□□□ -0.26
USF1-206ENST00000491629 RPIAP49247 311 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 THOP1P52888 689 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 YPEL5P62699 121 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 CYP4F2P78329 520 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 DEUP1Q05D60 604 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 STIM1Q13586 685 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 TBR1Q16650 682 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 FAXCQ5TGI0 409 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 RETSATQ6NUM9 610 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 DPY19L2P1Q6NXN4 242 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 ZNF783Q6ZMS7 281 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 LEKR1Q6ZMV7 388 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 ENOSF1Q7L5Y1 443 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 ZSCAN30Q86W11 494 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 JAMLQ86YT9 394 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 PLPP6Q8IY26 295 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 DRC7Q8IY82 874 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 NETO2Q8NC67 525 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 TSACCQ96A04 125 aaPredicted RBP13.41□□□□□ -0.26
USF1-206ENST00000491629 RAB7BQ96AH8 199 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 ISG20Q96AZ6 181 aaKnown RBP13.41□□□□□ -0.26
USF1-206ENST00000491629 CCDC34Q96HJ3 373 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 KLHL32Q96NJ5 620 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 GFM1Q96RP9 751 aaKnown RBP13.41□□□□□ -0.26
USF1-206ENST00000491629 SLC13A1Q9BZW2 595 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 WDR70Q9NW82 654 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 RRN3Q9NYV6 651 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 FOXJ2Q9P0K8 574 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 NEU3Q9UQ49 428 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 PCDHGA4Q9Y5G9 962 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 SPTBN1Q01082 2364 aaKnown RBP13.4□□□□□ -0.26
USF1-206ENST00000491629 PRAMEF33A0A0G2JMD5 474 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 NVLO15381 856 aaKnown RBP13.4□□□□□ -0.26
USF1-206ENST00000491629 PRAMEF10O60809 474 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 RPLP0P05388 317 aaKnown RBP13.4□□□□□ -0.26
USF1-206ENST00000491629 LIPCP11150 499 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 CCKBRP32239 447 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 GABRB2P47870 512 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 HK3P52790 923 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 INHBCP55103 352 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 MORC3Q14149 939 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 CLCA4Q14CN2 919 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 ALG11Q2TAA5 492 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 SLC25A52Q3SY17 297 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 C2CD6Q53TS8 623 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 ATXN7L2Q5T6C5 722 aaPredicted RBP13.4□□□□□ -0.26
USF1-206ENST00000491629 MANEALQ5VSG8 457 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 ESRP1Q6NXG1 681 aaKnown RBP13.4□□□□□ -0.26
USF1-206ENST00000491629 LRRC31Q6UY01 552 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 ATG14Q6ZNE5 492 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 NLRP14Q86W24 1093 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 ZFAND4Q86XD8 727 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 DTX1Q86Y01 620 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 XYLT1Q86Y38 959 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 ARL10Q8N8L6 244 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 ARHGEF2Q92974 986 aaKnown RBP13.4□□□□□ -0.26
USF1-206ENST00000491629 GLMNQ92990 594 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 TIGD1Q96MW7 591 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 EPAS1Q99814 870 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 SEMA3CQ99985 751 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 FUCA2Q9BTY2 467 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 CPEB1Q9BZB8 566 aaKnown RBP13.4□□□□□ -0.26
USF1-206ENST00000491629 ZYG11BQ9C0D3 744 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 APEX2Q9UBZ4 518 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 PISDQ9UG56 409 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 COQ6Q9Y2Z9 468 aa13.4□□□□□ -0.26
USF1-206ENST00000491629 C9orf172C9J069 976 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 FAM72CH0Y354 149 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 FOXN3O00409 490 aaPredicted RBP13.39□□□□□ -0.27
USF1-206ENST00000491629 KRIT1O00522 736 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 NEMP1O14524 444 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 GSRP00390 522 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 TIMP2P16035 220 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 PON1P27169 355 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 PPARDQ03181 441 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 ZFP36L1Q07352 338 aaKnown RBP13.39□□□□□ -0.27
USF1-206ENST00000491629 EIF3IQ13347 325 aaKnown RBP13.39□□□□□ -0.27
USF1-206ENST00000491629 PTK2BQ14289 1009 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 IRF4Q15306 451 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 KLHL40Q2TBA0 621 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 MYLK3Q32MK0 819 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 FAM72AQ5TYM5 149 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 FAM72DQ6L9T8 149 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 XKR5Q6UX68 686 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 FAM72BQ86X60 149 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 FAM131BQ86XD5 332 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 HID1Q8IV36 788 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 GPR156Q8NFN8 814 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 OR2AP1Q8NGE2 309 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 CFAP57Q96MR6 1250 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 HAPLN3Q96S86 360 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 EDEM3Q9BZQ6 932 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 LRRN3Q9H3W5 708 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 PPARGC1AQ9UBK2 798 aaKnown RBP13.39□□□□□ -0.27
USF1-206ENST00000491629 TMEM59LQ9UK28 342 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 STAP1Q9ULZ2 295 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 LOXL2Q9Y4K0 774 aa13.39□□□□□ -0.27
USF1-206ENST00000491629 ICE1Q9Y2F5 2266 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms