RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	ATP1A2	P50993	1020 aa		19.52	■□□□□ 0.72
CDK5RAP2-218	ENST00000491334	PMS1	P54277	932 aa	Known RBP	19.52	■□□□□ 0.72
CDK5RAP2-218	ENST00000491334	POLE2	P56282	527 aa		19.52	■□□□□ 0.72
CDK5RAP2-218	ENST00000491334	SNX16	P57768	344 aa		19.52	■□□□□ 0.72
CDK5RAP2-218	ENST00000491334	COBLL1	Q53SF7	1204 aa		19.52	■□□□□ 0.72
CDK5RAP2-218	ENST00000491334	C11orf57	Q6ZUT1	292 aa	Predicted RBP	19.52	■□□□□ 0.72
CDK5RAP2-218	ENST00000491334	RD3	Q7Z3Z2	195 aa		19.52	■□□□□ 0.72
CDK5RAP2-218	ENST00000491334	TTC7B	Q86TV6	843 aa		19.52	■□□□□ 0.72
CDK5RAP2-218	ENST00000491334	TSACC	Q96A04	125 aa	Predicted RBP	19.52	■□□□□ 0.72
CDK5RAP2-218	ENST00000491334	LRRC4C	Q9HCJ2	640 aa		19.52	■□□□□ 0.72
CDK5RAP2-218	ENST00000491334	MBNL1	Q9NR56	388 aa	Known RBP	19.52	■□□□□ 0.72
CDK5RAP2-218	ENST00000491334	TMEM51	Q9NW97	253 aa		19.52	■□□□□ 0.72
CDK5RAP2-218	ENST00000491334	RRN3	Q9NYV6	651 aa		19.52	■□□□□ 0.72
CDK5RAP2-218	ENST00000491334	FCF1	Q9Y324	198 aa	Known RBP	19.52	■□□□□ 0.72
CDK5RAP2-218	ENST00000491334	PAXBP1	Q9Y5B6	917 aa		19.52	■□□□□ 0.72
CDK5RAP2-218	ENST00000491334	RNF215	Q9Y6U7	377 aa		19.52	■□□□□ 0.72
CDK5RAP2-218	ENST00000491334	STMND1	H3BQB6	276 aa		19.51	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	MMP20	O60882	483 aa		19.51	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	ZNF202	O95125	648 aa		19.51	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	GNA15	P30679	374 aa		19.51	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	CXCR3	P49682	368 aa		19.51	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	CCDC40	Q4G0X9	1142 aa		19.51	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	ZNF658	Q5TYW1	1059 aa	Predicted RBP	19.51	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	GPR156	Q8NFN8	814 aa		19.51	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	CPXM1	Q96SM3	734 aa		19.51	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	GTPBP4	Q9BZE4	634 aa	Known RBP	19.51	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	TM6SF2	Q9BZW4	377 aa		19.51	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	PIGV	Q9NUD9	493 aa		19.51	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	IGLV3-10	A0A075B6K4	115 aa		19.5	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	AREL1	O15033	823 aa		19.5	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	POP4	O95707	220 aa	Known RBP	19.5	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	F9	P00740	461 aa		19.5	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	ARHGEF7	Q14155	803 aa		19.5	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	TCEA2	Q15560	299 aa		19.5	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	ALG11	Q2TAA5	492 aa		19.5	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	PHF19	Q5T6S3	580 aa		19.5	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	ENPP7	Q6UWV6	458 aa		19.5	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	ATL2	Q8NHH9	583 aa		19.5	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	CXorf40A	Q8TE69	158 aa		19.5	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	JPH3	Q8WXH2	748 aa	Predicted RBP	19.5	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	CEP63	Q96MT8	703 aa		19.5	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	CATSPER2	Q96P56	530 aa		19.5	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	EPAS1	Q99814	870 aa		19.5	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	OSBPL1A	Q9BXW6	950 aa		19.5	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	UBE2T	Q9NPD8	197 aa	Predicted RBP	19.5	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	SNX10	Q9Y5X0	201 aa		19.5	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	SCN8A	Q9UQD0	1980 aa		19.5	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	CXorf51A	A0A1B0GTR3	108 aa		19.49	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	KRIT1	O00522	736 aa		19.49	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	SRGAP2	O75044	1071 aa		19.49	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	HSP90AA1	P07900	732 aa	Known RBP	19.49	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	GK	P32189	559 aa		19.49	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	SRP54	P61011	504 aa	Known RBP	19.49	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	ARF5	P84085	180 aa		19.49	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	GNA12	Q03113	381 aa		19.49	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	POLD3	Q15054	466 aa	Predicted RBP	19.49	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	KLHL40	Q2TBA0	621 aa		19.49	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	OGFOD3	Q6PK18	319 aa		19.49	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	OLFML1	Q6UWY5	402 aa		19.49	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	WDTC1	Q8N5D0	677 aa		19.49	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	TP53I13	Q8NBR0	393 aa	Predicted RBP	19.49	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	GPBAR1	Q8TDU6	330 aa		19.49	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	NKD1	Q969G9	470 aa		19.49	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	KLHL32	Q96NJ5	620 aa		19.49	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	ANLN	Q9NQW6	1124 aa		19.49	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	LRIT1	Q9P2V4	623 aa		19.49	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	BLACE	A4D250	179 aa		19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	TRIM49B	A6NDI0	452 aa		19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	DAB1	O75553	588 aa		19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	TNF	P01375	233 aa		19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	UGT2B4	P06133	528 aa		19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	GEMIN4	P57678	1058 aa	Known RBP	19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	SNRPD1	P62314	119 aa	Known RBP	19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	SLC6A3	Q01959	620 aa		19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	LRRC14	Q15048	493 aa		19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	MYLK3	Q32MK0	819 aa		19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	CERCAM	Q5T4B2	595 aa		19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	FAM183BP	Q6ZVS7	135 aa		19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	SLC26A9	Q7LBE3	791 aa		19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	SPRED1	Q7Z699	444 aa		19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	PIM3	Q86V86	326 aa		19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	SLITRK4	Q8IW52	837 aa		19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	IL22RA1	Q8N6P7	574 aa		19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	OR6K2	Q8NGY2	324 aa		19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	GSDMA	Q96QA5	445 aa		19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	NPY6R	Q99463	290 aa		19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	CDH19	Q9H159	772 aa		19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	ACP6	Q9NPH0	428 aa		19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	STAP1	Q9ULZ2	295 aa		19.48	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334		I6L893	689 aa	Predicted RBP	19.47	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	ETFB	P38117	255 aa		19.47	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	DEUP1	Q05D60	604 aa		19.47	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	GDPD4	Q6W3E5	623 aa		19.47	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	ENOSF1	Q7L5Y1	443 aa		19.47	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	FAM46D	Q8NEK8	389 aa		19.47	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	ZNF397	Q8NF99	534 aa	Predicted RBP	19.47	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	OR2AP1	Q8NGE2	309 aa		19.47	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	C9orf43	Q8TAL5	461 aa	Predicted RBP	19.47	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	TAAR9	Q96RI9	348 aa		19.47	■□□□□ 0.71
CDK5RAP2-218	ENST00000491334	APOO	Q9BUR5	198 aa		19.47	■□□□□ 0.71

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms