RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 EBF2Q9HAK2 575 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 TCF19Q9Y242 345 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 TROQ12816 1431 aaPredicted RBP4.06□□□□□ -1.76
PHC3-213ENST00000491258 hDV102S1A0JD36 115 aa4.06□□□□□ -1.76
PHC3-213ENST00000491258 FAM72CH0Y354 149 aa4.06□□□□□ -1.76
PHC3-213ENST00000491258 J3KR12 359 aa4.06□□□□□ -1.76
PHC3-213ENST00000491258 STRNO43815 780 aa4.06□□□□□ -1.76
PHC3-213ENST00000491258 KDM4BO94953 1096 aa4.06□□□□□ -1.76
PHC3-213ENST00000491258 AMBPP02760 352 aa4.06□□□□□ -1.76
PHC3-213ENST00000491258 TFRCP02786 760 aaKnown RBP4.06□□□□□ -1.76
PHC3-213ENST00000491258 CETPP11597 493 aa4.06□□□□□ -1.76
PHC3-213ENST00000491258 AVPR2P30518 371 aa4.06□□□□□ -1.76
PHC3-213ENST00000491258 RPS6KA3P51812 740 aa4.06□□□□□ -1.76
PHC3-213ENST00000491258 ZBTB17Q13105 803 aa4.06□□□□□ -1.76
PHC3-213ENST00000491258 CAPSQ13938 189 aa4.06□□□□□ -1.76
PHC3-213ENST00000491258 FAM72AQ5TYM5 149 aa4.06□□□□□ -1.76
PHC3-213ENST00000491258 FAM69BQ5VUD6 431 aa4.06□□□□□ -1.76
PHC3-213ENST00000491258 FAM72DQ6L9T8 149 aa4.06□□□□□ -1.76
PHC3-213ENST00000491258 SYNE3Q6ZMZ3 975 aa4.06□□□□□ -1.76
PHC3-213ENST00000491258 FAM72BQ86X60 149 aa4.06□□□□□ -1.76
PHC3-213ENST00000491258 CCAR1Q8IX12 1150 aaKnown RBP4.06□□□□□ -1.76
PHC3-213ENST00000491258 OR1N1Q8NGS0 311 aa4.06□□□□□ -1.76
PHC3-213ENST00000491258 LRRC4Q9HBW1 653 aa4.06□□□□□ -1.76
PHC3-213ENST00000491258 ZNF334Q9HCZ1 680 aaPredicted RBP4.06□□□□□ -1.76
PHC3-213ENST00000491258 WDR6Q9NNW5 1121 aaKnown RBP4.06□□□□□ -1.76
PHC3-213ENST00000491258 SMARCAL1Q9NZC9 954 aa4.06□□□□□ -1.76
PHC3-213ENST00000491258 GRHL1Q9NZI5 618 aa4.06□□□□□ -1.76
PHC3-213ENST00000491258 OR6C3Q9NZP0 311 aa4.06□□□□□ -1.76
PHC3-213ENST00000491258 SNX9Q9Y5X1 595 aa4.06□□□□□ -1.76
PHC3-213ENST00000491258 MAGI2Q86UL8 1455 aa4.05□□□□□ -1.76
PHC3-213ENST00000491258 POGZQ7Z3K3 1410 aa4.05□□□□□ -1.76
PHC3-213ENST00000491258 IGKV3D-15A0A087WSY6 115 aa4.05□□□□□ -1.76
PHC3-213ENST00000491258 HNRNPRO43390 633 aaKnown RBP4.05□□□□□ -1.76
PHC3-213ENST00000491258 TNFRSF6BO95407 300 aa4.05□□□□□ -1.76
PHC3-213ENST00000491258 DHRS4L1P0CG22 281 aa4.05□□□□□ -1.76
PHC3-213ENST00000491258 CDKN1AP38936 164 aa4.05□□□□□ -1.76
PHC3-213ENST00000491258 LIFRP42702 1097 aa4.05□□□□□ -1.76
PHC3-213ENST00000491258 GALNTL6Q49A17 601 aa4.05□□□□□ -1.76
PHC3-213ENST00000491258 NFRKBQ6P4R8 1299 aa4.05□□□□□ -1.76
PHC3-213ENST00000491258 SFR1Q86XK3 245 aa4.05□□□□□ -1.76
PHC3-213ENST00000491258 MB21D2Q8IYB1 491 aaPredicted RBP4.05□□□□□ -1.76
PHC3-213ENST00000491258 CCDC105Q8IYK2 499 aa4.05□□□□□ -1.76
PHC3-213ENST00000491258 RTKNQ9BST9 563 aa4.05□□□□□ -1.76
PHC3-213ENST00000491258 CXorf56Q9H5V9 222 aa4.05□□□□□ -1.76
PHC3-213ENST00000491258 ELAC1Q9H777 363 aaKnown RBP4.05□□□□□ -1.76
PHC3-213ENST00000491258 ZFP57Q9NU63 452 aa4.05□□□□□ -1.76
PHC3-213ENST00000491258 DDX43Q9NXZ2 648 aaKnown RBP4.05□□□□□ -1.76
PHC3-213ENST00000491258 CFDP1Q9UEE9 299 aaPredicted RBP4.05□□□□□ -1.76
PHC3-213ENST00000491258 BAG5Q9UL15 447 aa4.05□□□□□ -1.76
PHC3-213ENST00000491258 ZCCHC11Q5TAX3 1644 aaKnown RBP4.05□□□□□ -1.76
PHC3-213ENST00000491258 ATP10AO60312 1499 aa4.05□□□□□ -1.76
PHC3-213ENST00000491258 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 CASKIN1Q8WXD9 1431 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 MAP3K4Q9Y6R4 1608 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 C16orf97H3BN30 126 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 CLDN14O95500 239 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 MYF6P23409 242 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 TM4SF4P48230 202 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 CDK7P50613 346 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 FAM27E3Q08E93 113 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 LPIN1Q14693 890 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 LRRC24Q50LG9 513 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 C19orf48Q6RUI8 117 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 SYTL1Q8IYJ3 562 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 CIARTQ8N365 385 aaPredicted RBP4.04□□□□□ -1.76
PHC3-213ENST00000491258 OR13A1Q8NGR1 328 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 CSF3RQ99062 836 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 ZNF696Q9H7X3 374 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 PTPRHQ9HD43 1115 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 DAPP1Q9UN19 280 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 VDAC3Q9Y277 283 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 MED1Q15648 1581 aaPredicted RBP4.04□□□□□ -1.76
PHC3-213ENST00000491258 SAMD9Q5K651 1589 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 EFCAB5A4FU69 1503 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 CDK13Q14004 1512 aaKnown RBP4.04□□□□□ -1.76
PHC3-213ENST00000491258 CLIP1P30622 1438 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 TRAPPC8Q9Y2L5 1435 aa4.04□□□□□ -1.76
PHC3-213ENST00000491258 TP53BP1Q12888 1972 aaPredicted RBP4.03□□□□□ -1.76
PHC3-213ENST00000491258 SPAG9O60271 1321 aaKnown RBP4.03□□□□□ -1.76
PHC3-213ENST00000491258 ZNF644Q9H582 1327 aaPredicted RBP4.03□□□□□ -1.76
PHC3-213ENST00000491258 LOC105371045A0A1W2PR82 267 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 FAM157AC9JC47 383 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 GAGE7O76087 117 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 IL1AP01583 271 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 LINC00271P0C7V0 271 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 GAGE12FP0CL80 117 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 GAGE12GP0CL81 117 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 GAGE12IP0CL82 117 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 GAGE1Q13065 139 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 GAGE4Q13068 117 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 TNFAIP1Q13829 316 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 CCDC129Q6ZRS4 1044 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 KRTAP5-2Q701N4 177 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 RAB11FIP2Q7L804 512 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 OR4N2Q8NGD1 307 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 RASSF8Q8NHQ8 419 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 PARD3BQ8TEW8 1205 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 CPT1BQ92523 772 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 C3orf30Q96M34 536 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 CCDC138Q96M89 665 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms