RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 LIPAP38571 399 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC1A1P43005 524 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC1A4P43007 532 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 PEX5P50542 639 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ALDH5A1P51649 535 aaPredicted RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF131P52739 623 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 PLTPP55058 493 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 TPTEP56180 551 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 PTENP60484 403 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ELF3P78545 371 aaPredicted RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 DR1Q01658 176 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 DSC2Q02487 901 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 RNASELQ05823 741 aaKnown RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 GABPAQ06546 454 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF543Q08ER8 600 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 BNIP1Q12981 228 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 PDCLQ13371 301 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ALCAMQ13740 583 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 RAPGEF1Q13905 1077 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 KIF22Q14807 665 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 DRAP1Q14919 205 aaPredicted RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 PPP1R7Q15435 360 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 TRADDQ15628 312 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ZKSCAN8Q15776 578 aaPredicted RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ETFDHQ16134 617 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 CCNG2Q16589 344 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 CYP1B1Q16678 543 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC35G1Q2M3R5 365 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 PARP6Q2NL67 630 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 KRT71Q3SY84 523 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 MGAT5BQ3V5L5 792 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 GALNTL6Q49A17 601 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC44A4Q53GD3 710 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 CEP78Q5JTW2 689 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 KIAA0895LQ68EN5 471 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 TTC19Q6DKK2 380 aaPredicted RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ACAD10Q6JQN1 1059 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 RINT1Q6NUQ1 792 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 HIBCHQ6NVY1 386 aaPredicted RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 PPP1R2P3Q6NXS1 205 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ANKRD16Q6P6B7 361 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 CYB5D1Q6P9G0 228 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF782Q6ZMW2 699 aaPredicted RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 C1orf186Q6ZWK4 172 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 USP45Q70EL2 814 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ENOSF1Q7L5Y1 443 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 TRPM8Q7Z2W7 1104 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF571Q7Z3V5 609 aaPredicted RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 WDR53Q7Z5U6 358 aaPredicted RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 DAAM2Q86T65 1068 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 EXOC3L1Q86VI1 746 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 NBPF5PQ86XG9 351 aaPredicted RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 CEP57Q86XR8 500 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 C12orf56Q8IXR9 622 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC15A3Q8IY34 581 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 CCDC13Q8IYE1 715 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 TEX11Q8IYF3 940 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 RCOR2Q8IZ40 523 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 SPARTQ8N0X7 666 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 CBARPQ8N350 705 aaPredicted RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC15A4Q8N697 577 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 MYCT1Q8N699 235 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 NANOGP1Q8N7R0 232 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 FAM133AQ8N9E0 248 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 CCDC63Q8NA47 563 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 NSUN6Q8TEA1 469 aaKnown RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 LRRC15Q8TF66 581 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 GRK7Q8WTQ7 553 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 U2AF1L4Q8WU68 220 aaKnown RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 CHURC1Q8WUH1 139 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 CTNNBL1Q8WYA6 563 aaPredicted RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 DPF1Q92782 380 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 KAT2BQ92831 832 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 KIFAP3Q92845 792 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 GLG1Q92896 1179 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 SLCO2A1Q92959 643 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ART4Q93070 314 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 HPS3Q969F9 1004 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ZKSCAN4Q969J2 545 aaPredicted RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 HVCN1Q96D96 273 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 SAAL1Q96ER3 474 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 DYNLL2Q96FJ2 89 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 EEF2KMTQ96G04 330 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC35A4Q96G79 324 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 RBM17Q96I25 401 aaKnown RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 RSRC1Q96IZ7 334 aaKnown RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 VCPIP1Q96JH7 1222 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 MAGEB18Q96M61 343 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 C5orf34Q96MH7 638 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 HS6ST2Q96MM7 605 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ASB2Q96Q27 587 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 TMEM237Q96Q45 408 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 PSMD1Q99460 953 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 FMO2Q99518 471 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ELAC2Q9BQ52 826 aaKnown RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 VKORC1Q9BQB6 163 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 TIPINQ9BVW5 301 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 AP1M1Q9BXS5 423 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 COA1Q9GZY4 146 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 NSRP1Q9H0G5 558 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms