RNA–Protein interactions for RNA: ENST00000490723.1

PHC3-212, Transcript of polyhomeotic homolog 3, human

TSL 2

Gene PHC3, Length 264 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHC3-212	ENST00000490723	TRIB2	Q92519	343 aa		4.36	□□□□□ -1.71
PHC3-212	ENST00000490723	SCLT1	Q96NL6	688 aa		4.36	□□□□□ -1.71
PHC3-212	ENST00000490723	EYA3	Q99504	573 aa		4.36	□□□□□ -1.71
PHC3-212	ENST00000490723	ANKRD10	Q9NXR5	420 aa		4.36	□□□□□ -1.71
PHC3-212	ENST00000490723	OR6C3	Q9NZP0	311 aa		4.36	□□□□□ -1.71
PHC3-212	ENST00000490723	PAM16	Q9Y3D7	125 aa		4.36	□□□□□ -1.71
PHC3-212	ENST00000490723	NOTCH4	Q99466	2003 aa		4.36	□□□□□ -1.71
PHC3-212	ENST00000490723	EME2	A4GXA9	379 aa	Predicted RBP	4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	BTBD18	B2RXH4	712 aa		4.35	□□□□□ -1.71
PHC3-212	ENST00000490723		J3KR12	359 aa		4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	VNN2	O95498	520 aa		4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	SLC2A4	P14672	509 aa		4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	CXCR3	P49682	368 aa		4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	COMP	P49747	757 aa	Predicted RBP	4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	DDR1	Q08345	913 aa		4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	ST3GAL1	Q11201	340 aa		4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	GRSF1	Q12849	480 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	NFIL3	Q16649	462 aa		4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	EFHC1	Q5JVL4	640 aa		4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	C17orf99	Q6UX52	265 aa		4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	H1FNT	Q75WM6	255 aa	Predicted RBP	4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	C16orf82	Q7Z2V1	217 aa		4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	NR2C2AP	Q86WQ0	139 aa		4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	CPO	Q8IVL8	374 aa		4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	TCP11L2	Q8N4U5	519 aa		4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	LSM14A	Q8ND56	463 aa	Known RBP	4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	ARRDC2	Q8TBH0	407 aa		4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	PHF7	Q9BWX1	381 aa	Predicted RBP	4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	IL1RAPL1	Q9NZN1	696 aa		4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	PEMT	Q9UBM1	199 aa		4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	CTNNAL1	Q9UBT7	734 aa		4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	NDRG3	Q9UGV2	375 aa		4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	HSF4	Q9ULV5	492 aa		4.35	□□□□□ -1.71
PHC3-212	ENST00000490723	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	PLSCR5	A0PG75	271 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	IFITM10	A6NMD0	228 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	EBAG9	O00559	213 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	PPP1R3D	O95685	299 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	CH25H	O95992	272 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	ZNF8	P17098	575 aa	Predicted RBP	4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	SRD5A1	P18405	259 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	CNTF	P26441	200 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	PGM1	P36871	562 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	BLK	P51451	505 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	YWHAZ	P63104	245 aa	Known RBP	4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	TUBA1B	P68363	451 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	ARHGEF6	Q15052	776 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	ZNF667	Q5HYK9	610 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	C9orf57	Q5W0N0	161 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	SLC22A25	Q6T423	547 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	BBS12	Q6ZW61	710 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	TBC1D26	Q86UD7	250 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	FAM160B2	Q86V87	743 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	KIAA2013	Q8IYS2	634 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	AADAT	Q8N5Z0	425 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	C1QTNF4	Q9BXJ3	329 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	NUF2	Q9BZD4	464 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	IL25	Q9H293	177 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	TTYH1	Q9H313	450 aa	Predicted RBP	4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	PLSCR4	Q9NRQ2	329 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	CYSLTR2	Q9NS75	346 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	BABAM1	Q9NWV8	329 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	SLC45A1	Q9Y2W3	748 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	DOCK7	Q96N67	2140 aa		4.34	□□□□□ -1.71
PHC3-212	ENST00000490723	CBY3	A6NI87	242 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	HSPB2	A8KAH6	182 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	KLRF2	D3W0D1	207 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	RYK	P34925	604 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	PIGA	P37287	484 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	CCR5	P51681	352 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	GAS1	P54826	345 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	RPL36A	P83881	106 aa	Known RBP	4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	EEF1A2	Q05639	463 aa	Known RBP	4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	CHRND	Q07001	517 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	COASY	Q13057	564 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	MYBPH	Q13203	477 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	HSPB2	Q16082	182 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	ESCO2	Q56NI9	601 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	XKR9	Q5GH70	373 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	KLHL24	Q6TFL4	600 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	LRRTM4	Q86VH4	590 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	SFTPA2	Q8IWL1	248 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	PARP16	Q8N5Y8	322 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	GJC3	Q8NFK1	279 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	HERVK_113	Q902F9	699 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	GCC1	Q96CN9	775 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	ELP4	Q96EB1	424 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	SNTG1	Q9NSN8	517 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	CNOT7	Q9UIV1	285 aa	Known RBP	4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	DGKB	Q9Y6T7	804 aa		4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	TCF20	Q9UGU0	1960 aa	Known RBP	4.33	□□□□□ -1.72
PHC3-212	ENST00000490723	DENND3	A2RUS2	1198 aa		4.32	□□□□□ -1.72
PHC3-212	ENST00000490723	SMTNL1	A8MU46	457 aa		4.32	□□□□□ -1.72
PHC3-212	ENST00000490723	PCNA	P12004	261 aa		4.32	□□□□□ -1.72
PHC3-212	ENST00000490723	HSD3B1	P14060	373 aa		4.32	□□□□□ -1.72
PHC3-212	ENST00000490723	PTPN2	P17706	415 aa		4.32	□□□□□ -1.72
PHC3-212	ENST00000490723	EDN2	P20800	178 aa		4.32	□□□□□ -1.72
PHC3-212	ENST00000490723	GPD2	P43304	727 aa		4.32	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms