RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 FBXL19Q6PCT2 694 aa12.94□□□□□ -0.34
SHOX2-205ENST00000490689 LCLAT1Q6UWP7 414 aa12.94□□□□□ -0.34
SHOX2-205ENST00000490689 SPATA31D4Q6ZUB0 917 aa12.94□□□□□ -0.34
SHOX2-205ENST00000490689 CCDC117Q8IWD4 279 aaPredicted RBP12.94□□□□□ -0.34
SHOX2-205ENST00000490689 CNTD1Q8N815 330 aa12.94□□□□□ -0.34
SHOX2-205ENST00000490689 HASPINQ8TF76 798 aa12.94□□□□□ -0.34
SHOX2-205ENST00000490689 WNT8BQ93098 351 aa12.94□□□□□ -0.34
SHOX2-205ENST00000490689 TRIM8Q9BZR9 551 aa12.94□□□□□ -0.34
SHOX2-205ENST00000490689 VPS45Q9NRW7 570 aa12.94□□□□□ -0.34
SHOX2-205ENST00000490689 DYNC1LI2O43237 492 aaPredicted RBP12.94□□□□□ -0.34
SHOX2-205ENST00000490689 IMPDH2P12268 514 aa12.94□□□□□ -0.34
SHOX2-205ENST00000490689 RPL10P27635 214 aaKnown RBP12.94□□□□□ -0.34
SHOX2-205ENST00000490689 ARL2P36404 184 aa12.94□□□□□ -0.34
SHOX2-205ENST00000490689 GMPSP49915 693 aaPredicted RBP12.94□□□□□ -0.34
SHOX2-205ENST00000490689 MGAT5BQ3V5L5 792 aa12.94□□□□□ -0.34
SHOX2-205ENST00000490689 SV2CQ496J9 727 aa12.94□□□□□ -0.34
SHOX2-205ENST00000490689 SCARA3Q6AZY7 606 aa12.94□□□□□ -0.34
SHOX2-205ENST00000490689 TRAF7Q6Q0C0 670 aa12.94□□□□□ -0.34
SHOX2-205ENST00000490689 EPGNQ6UW88 154 aa12.94□□□□□ -0.34
SHOX2-205ENST00000490689 ILDR2Q71H61 639 aa12.94□□□□□ -0.34
SHOX2-205ENST00000490689 CENPLQ8N0S6 344 aaPredicted RBP12.94□□□□□ -0.34
SHOX2-205ENST00000490689 REPS2Q8NFH8 660 aa12.94□□□□□ -0.34
SHOX2-205ENST00000490689 MAPK15Q8TD08 544 aa12.94□□□□□ -0.34
SHOX2-205ENST00000490689 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.94□□□□□ -0.34
SHOX2-205ENST00000490689 MCRS1Q96EZ8 462 aa12.94□□□□□ -0.34
SHOX2-205ENST00000490689 MRPL57Q9BQC6 102 aaKnown RBP12.94□□□□□ -0.34
SHOX2-205ENST00000490689 TBC1D13Q9NVG8 400 aa12.94□□□□□ -0.34
SHOX2-205ENST00000490689 SNX10Q9Y5X0 201 aa12.94□□□□□ -0.34
SHOX2-205ENST00000490689 RGL2O15211 777 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 MT-CYBP00156 380 aaPredicted RBP12.93□□□□□ -0.34
SHOX2-205ENST00000490689 LTA4HP09960 611 aaKnown RBP12.93□□□□□ -0.34
SHOX2-205ENST00000490689 MTHFD1P11586 935 aaKnown RBP12.93□□□□□ -0.34
SHOX2-205ENST00000490689 MAXP61244 160 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 TBC1D25Q3MII6 688 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 ARHGAP36Q6ZRI8 547 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 MIB1Q86YT6 1006 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 PQLC3Q8N755 202 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 ATG16L2Q8NAA4 619 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 HBEGFQ99075 208 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 OAZ3Q9UMX2 235 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 LOC100506127A0A0U1RQW1 187 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 MATN2O00339 956 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 MYL3P08590 195 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 MLNP12872 115 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 LBPP18428 481 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 PRDX6P30041 224 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 IREB2P48200 963 aaKnown RBP12.93□□□□□ -0.34
SHOX2-205ENST00000490689 TAS2R39P59534 338 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 MS4A2Q01362 244 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 ZRANB3Q5FWF4 1079 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 C6orf183Q5T699 404 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 HORMAD1Q86X24 394 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 OR8H2Q8N162 312 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 FBXO39Q8N4B4 442 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 C18orf25Q96B23 403 aaPredicted RBP12.93□□□□□ -0.34
SHOX2-205ENST00000490689 TRHDEQ9UKU6 1024 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 CNOT6Q9ULM6 557 aaKnown RBP12.93□□□□□ -0.34
SHOX2-205ENST00000490689 NCAM2O15394 837 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 SOAT2O75908 522 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 SLIT2O94813 1529 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 CYP2C9P11712 490 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 ZNF182P17025 639 aaPredicted RBP12.93□□□□□ -0.34
SHOX2-205ENST00000490689 IKBKEQ14164 716 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 PCID2Q5JVF3 399 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 MRNIPQ6NTE8 343 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 ESRP1Q6NXG1 681 aaKnown RBP12.93□□□□□ -0.34
SHOX2-205ENST00000490689 CRTC3Q6UUV7 619 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 ZYG11AQ6WRX3 759 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 ADGRG6Q86SQ4 1221 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 FAM83AQ86UY5 434 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 ZDHHC17Q8IUH5 632 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 POC5Q8NA72 575 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 ZBTB8BQ8NAP8 495 aaPredicted RBP12.93□□□□□ -0.34
SHOX2-205ENST00000490689 PPM1MQ96MI6 270 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 PRICKLE1Q96MT3 831 aaPredicted RBP12.93□□□□□ -0.34
SHOX2-205ENST00000490689 CATSPERBQ9H7T0 1116 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 CDC14AQ9UNH5 594 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 TNFSF13BQ9Y275 285 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 PKP3Q9Y446 797 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 TIMM22Q9Y584 194 aa12.93□□□□□ -0.34
SHOX2-205ENST00000490689 IQCA1LA6NCM1 817 aa12.92□□□□□ -0.34
SHOX2-205ENST00000490689 B4GALT4O60513 344 aa12.92□□□□□ -0.34
SHOX2-205ENST00000490689 SNAP91O60641 907 aa12.92□□□□□ -0.34
SHOX2-205ENST00000490689 CDK4P11802 303 aa12.92□□□□□ -0.34
SHOX2-205ENST00000490689 CES1P23141 567 aa12.92□□□□□ -0.34
SHOX2-205ENST00000490689 YWHAQP27348 245 aa12.92□□□□□ -0.34
SHOX2-205ENST00000490689 DEFA1P59665 94 aa12.92□□□□□ -0.34
SHOX2-205ENST00000490689 DEFA3P59666 94 aa12.92□□□□□ -0.34
SHOX2-205ENST00000490689 MAP1SQ66K74 1059 aaPredicted RBP12.92□□□□□ -0.34
SHOX2-205ENST00000490689 NOTUMQ6P988 496 aa12.92□□□□□ -0.34
SHOX2-205ENST00000490689 SLCO6A1Q86UG4 719 aa12.92□□□□□ -0.34
SHOX2-205ENST00000490689 MARVELD2Q8N4S9 558 aa12.92□□□□□ -0.34
SHOX2-205ENST00000490689 FBXL20Q96IG2 436 aa12.92□□□□□ -0.34
SHOX2-205ENST00000490689 MRIQ9BWK5 157 aa12.92□□□□□ -0.34
SHOX2-205ENST00000490689 DPEP3Q9H4B8 488 aa12.92□□□□□ -0.34
SHOX2-205ENST00000490689 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.92□□□□□ -0.34
SHOX2-205ENST00000490689 ASNA1O43681 348 aa12.92□□□□□ -0.34
SHOX2-205ENST00000490689 TOMM70O94826 608 aa12.92□□□□□ -0.34
SHOX2-205ENST00000490689 SEC24AO95486 1093 aa12.92□□□□□ -0.34
SHOX2-205ENST00000490689 TFAP2AP05549 437 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms