RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	CD27	P26842	260 aa		18.78	■□□□□ 0.6
C4A-256	ENST00000490663	CTNNA1	P35221	906 aa	Known RBP	18.78	■□□□□ 0.6
C4A-256	ENST00000490663	CSNK1E	P49674	416 aa	Known RBP	18.78	■□□□□ 0.6
C4A-256	ENST00000490663	LMNB2	Q03252	620 aa		18.78	■□□□□ 0.6
C4A-256	ENST00000490663	IFI16	Q16666	785 aa	Known RBP	18.78	■□□□□ 0.6
C4A-256	ENST00000490663	SLC23A3	Q6PIS1	610 aa		18.78	■□□□□ 0.6
C4A-256	ENST00000490663	NT5DC3	Q86UY8	548 aa		18.78	■□□□□ 0.6
C4A-256	ENST00000490663	GPR161	Q8N6U8	529 aa	Known RBP	18.78	■□□□□ 0.6
C4A-256	ENST00000490663	CCDC112	Q8NEF3	446 aa		18.78	■□□□□ 0.6
C4A-256	ENST00000490663	ALG3	Q92685	438 aa		18.78	■□□□□ 0.6
C4A-256	ENST00000490663	ZNF599	Q96NL3	588 aa		18.78	■□□□□ 0.6
C4A-256	ENST00000490663	PSKH2	Q96QS6	385 aa		18.78	■□□□□ 0.6
C4A-256	ENST00000490663	OSBPL1A	Q9BXW6	950 aa		18.78	■□□□□ 0.6
C4A-256	ENST00000490663	SLC6A14	Q9UN76	642 aa		18.78	■□□□□ 0.6
C4A-256	ENST00000490663	FADS3	Q9Y5Q0	445 aa		18.78	■□□□□ 0.6
C4A-256	ENST00000490663		A0A1W2PPC4	97 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	KCNK1	O00180	336 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	SLC31A1	O15431	190 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	CST8	O60676	142 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	WNT1	P04628	370 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	HLA-DQB2	P05538	268 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	SERPINF2	P08697	491 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	GNS	P15586	552 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	TIMP2	P16035	220 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	CCR5	P51681	352 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	ITK	Q08881	620 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	GRIK2	Q13002	908 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	ZNF211	Q13398	564 aa	Predicted RBP	18.77	■□□□□ 0.6
C4A-256	ENST00000490663	RFTN1	Q14699	578 aa	Predicted RBP	18.77	■□□□□ 0.6
C4A-256	ENST00000490663	TAZ	Q16635	292 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	MARC1	Q5VT66	337 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	KDM7A	Q6ZMT4	941 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	PAF1	Q8N7H5	531 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	NSMCE1	Q8WV22	266 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	RMDN1	Q96DB5	314 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	SUV39H2	Q9H5I1	410 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	PREB	Q9HCU5	417 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	SCUBE2	Q9NQ36	999 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	AASDHPPT	Q9NRN7	309 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	SEPT10	Q9P0V9	454 aa		18.77	■□□□□ 0.6
C4A-256	ENST00000490663	ARID1B	Q8NFD5	2236 aa	Predicted RBP	18.77	■□□□□ 0.59
C4A-256	ENST00000490663	SPTBN2	O15020	2390 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	C4orf47	A7E2U8	309 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	ZNF487	B1APH4	448 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	ZRANB2	O95218	330 aa	Known RBP eCLIP	18.76	■□□□□ 0.59
C4A-256	ENST00000490663	CTNNA2	P26232	953 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	HOXD12	P35452	270 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	DSC2	Q02487	901 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	AP1B1	Q10567	949 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	ZBTB17	Q13105	803 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	UAP1L1	Q3KQV9	507 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	TFDP3	Q5H9I0	405 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	STPG1	Q5TH74	334 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	PEX26	Q7Z412	305 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	TRIM69	Q86WT6	500 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	CCDC13	Q8IYE1	715 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	EXD1	Q8NHP7	514 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	PDCD6IP	Q8WUM4	868 aa	Known RBP	18.76	■□□□□ 0.59
C4A-256	ENST00000490663	MAML1	Q92585	1016 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	HDAC11	Q96DB2	347 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	LRIG1	Q96JA1	1093 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	SERAC1	Q96JX3	654 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	ZNF830	Q96NB3	372 aa	Predicted RBP	18.76	■□□□□ 0.59
C4A-256	ENST00000490663	FAM118B	Q9BPY3	351 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	MGME1	Q9BQP7	344 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	WRAP53	Q9BUR4	548 aa	Known RBP	18.76	■□□□□ 0.59
C4A-256	ENST00000490663	CPEB1	Q9BZB8	566 aa	Known RBP	18.76	■□□□□ 0.59
C4A-256	ENST00000490663	NOD2	Q9HC29	1040 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	LZTFL1	Q9NQ48	299 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	SUSD2	Q9UGT4	822 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	AMFR	Q9UKV5	643 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	PCDHGC4	Q9Y5F7	938 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	PCDHA3	Q9Y5H8	950 aa		18.76	■□□□□ 0.59
C4A-256	ENST00000490663	NEMP1	O14524	444 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	CDX4	O14627	284 aa	Predicted RBP	18.75	■□□□□ 0.59
C4A-256	ENST00000490663	KCNK3	O14649	394 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	MATN3	O15232	486 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	LAT	O43561	262 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	CR2	P20023	1033 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	CCNC	P24863	283 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	SERPINA4	P29622	427 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	DPP6	P42658	865 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	BCL2L1	Q07817	233 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	PPID	Q08752	370 aa	Known RBP	18.75	■□□□□ 0.59
C4A-256	ENST00000490663	TRAF2	Q12933	501 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	FGL2	Q14314	439 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	IHH	Q14623	411 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	PTPRR	Q15256	657 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	ZNF284	Q2VY69	593 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	CFAP58	Q5T655	872 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	TTC7B	Q86TV6	843 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	PRPF39	Q86UA1	669 aa	Known RBP	18.75	■□□□□ 0.59
C4A-256	ENST00000490663	HORMAD1	Q86X24	394 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	VSIG1	Q86XK7	387 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	RCOR2	Q8IZ40	523 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	CEP76	Q8TAP6	659 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	RBM41	Q96IZ5	413 aa	Known RBP	18.75	■□□□□ 0.59
C4A-256	ENST00000490663	OLFM3	Q96PB7	478 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	TSGA13	Q96PP4	275 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	NUDCD1	Q96RS6	583 aa		18.75	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms