RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 NOCTQ9UK39 431 aaKnown RBP16.09■□□□□ 0.17
PLOD3-216ENST00000489927 HPCAL4Q9UM19 191 aa16.09■□□□□ 0.17
PLOD3-216ENST00000489927 PCDHGA8Q9Y5G5 932 aa16.09■□□□□ 0.17
PLOD3-216ENST00000489927 LMO7DNF2Z398 122 aa16.08■□□□□ 0.16
PLOD3-216ENST00000489927 YY2O15391 372 aa16.08■□□□□ 0.16
PLOD3-216ENST00000489927 MMP20O60882 483 aa16.08■□□□□ 0.16
PLOD3-216ENST00000489927 TM7SF2O76062 418 aa16.08■□□□□ 0.16
PLOD3-216ENST00000489927 GJB6O95452 261 aa16.08■□□□□ 0.16
PLOD3-216ENST00000489927 ITIH2P19823 946 aa16.08■□□□□ 0.16
PLOD3-216ENST00000489927 MMP8P22894 467 aa16.08■□□□□ 0.16
PLOD3-216ENST00000489927 YPEL5P62699 121 aa16.08■□□□□ 0.16
PLOD3-216ENST00000489927 C1QBPQ07021 282 aaKnown RBP16.08■□□□□ 0.16
PLOD3-216ENST00000489927 LY6DQ14210 128 aa16.08■□□□□ 0.16
PLOD3-216ENST00000489927 FOXR1Q6PIV2 292 aa16.08■□□□□ 0.16
PLOD3-216ENST00000489927 GDPD4Q6W3E5 623 aa16.08■□□□□ 0.16
PLOD3-216ENST00000489927 CCDC185Q8N715 623 aa16.08■□□□□ 0.16
PLOD3-216ENST00000489927 NETO2Q8NC67 525 aa16.08■□□□□ 0.16
PLOD3-216ENST00000489927 JOSD2Q8TAC2 188 aa16.08■□□□□ 0.16
PLOD3-216ENST00000489927 TTC9Q92623 222 aa16.08■□□□□ 0.16
PLOD3-216ENST00000489927 GLMNQ92990 594 aa16.08■□□□□ 0.16
PLOD3-216ENST00000489927 TBC1D31Q96DN5 1066 aa16.08■□□□□ 0.16
PLOD3-216ENST00000489927 CCDC3Q9BQI4 270 aa16.08■□□□□ 0.16
PLOD3-216ENST00000489927 SLC13A1Q9BZW2 595 aa16.08■□□□□ 0.16
PLOD3-216ENST00000489927 C2CD4BA6NLJ0 364 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 CDRT15L2A8MXV6 281 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 BUB1O43683 1085 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 KDELR3O43731 214 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 TMCC1O94876 653 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 CYP1A1P04798 512 aaPredicted RBP16.07■□□□□ 0.16
PLOD3-216ENST00000489927 ANXA6P08133 673 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 CELA2BP08218 269 aaPredicted RBP16.07■□□□□ 0.16
PLOD3-216ENST00000489927 PLEKP08567 350 aaPredicted RBP16.07■□□□□ 0.16
PLOD3-216ENST00000489927 TSHRP16473 764 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 EIF4A3P38919 411 aaKnown RBP16.07■□□□□ 0.16
PLOD3-216ENST00000489927 PTPN9P43378 593 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 HDAC4P56524 1084 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 KLHL40Q2TBA0 621 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 FAXCQ5TGI0 409 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 MACC1Q6ZN28 852 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 ZNF677Q86XU0 584 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 ARL14Q8N4G2 192 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 TP53I13Q8NBR0 393 aaPredicted RBP16.07■□□□□ 0.16
PLOD3-216ENST00000489927 WDR36Q8NI36 951 aaKnown RBP16.07■□□□□ 0.16
PLOD3-216ENST00000489927 SLC30A5Q8TAD4 765 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 CXorf40AQ8TE69 158 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 NAT6Q93015 286 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 TBATAQ96M53 351 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 GDAP1L1Q96MZ0 367 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 EPAS1Q99814 870 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 C11orf70Q9BRQ4 267 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 WRAP53Q9BUR4 548 aaKnown RBP16.07■□□□□ 0.16
PLOD3-216ENST00000489927 TTYH3Q9C0H2 523 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 SAMSN1Q9NSI8 373 aaKnown RBP16.07■□□□□ 0.16
PLOD3-216ENST00000489927 PADI4Q9UM07 663 aa16.07■□□□□ 0.16
PLOD3-216ENST00000489927 CHD5Q8TDI0 1954 aa16.06■□□□□ 0.16
PLOD3-216ENST00000489927 J3QKU1 62 aa16.06■□□□□ 0.16
PLOD3-216ENST00000489927 GFPT2O94808 682 aa16.06■□□□□ 0.16
PLOD3-216ENST00000489927 TNFSF15O95150 251 aa16.06■□□□□ 0.16
PLOD3-216ENST00000489927 TIMP2P16035 220 aa16.06■□□□□ 0.16
PLOD3-216ENST00000489927 CHRNB2P17787 502 aa16.06■□□□□ 0.16
PLOD3-216ENST00000489927 ERCC5P28715 1186 aaPredicted RBP16.06■□□□□ 0.16
PLOD3-216ENST00000489927 FMO1Q01740 532 aa16.06■□□□□ 0.16
PLOD3-216ENST00000489927 CDR2Q01850 454 aa16.06■□□□□ 0.16
PLOD3-216ENST00000489927 PPARDQ03181 441 aa16.06■□□□□ 0.16
PLOD3-216ENST00000489927 SPIDRQ14159 915 aa16.06■□□□□ 0.16
PLOD3-216ENST00000489927 ESRP1Q6NXG1 681 aaKnown RBP16.06■□□□□ 0.16
PLOD3-216ENST00000489927 STRADAQ7RTN6 431 aa16.06■□□□□ 0.16
PLOD3-216ENST00000489927 ZNF354CQ86Y25 554 aa16.06■□□□□ 0.16
PLOD3-216ENST00000489927 WDR48Q8TAF3 677 aa16.06■□□□□ 0.16
PLOD3-216ENST00000489927 FAM172AQ8WUF8 416 aa16.06■□□□□ 0.16
PLOD3-216ENST00000489927 CENPIQ92674 756 aaPredicted RBP16.06■□□□□ 0.16
PLOD3-216ENST00000489927 CCDC97Q96F63 343 aaPredicted RBP16.06■□□□□ 0.16
PLOD3-216ENST00000489927 C1QTNF7Q9BXJ2 289 aa16.06■□□□□ 0.16
PLOD3-216ENST00000489927 NOL6Q9H6R4 1146 aaKnown RBP16.06■□□□□ 0.16
PLOD3-216ENST00000489927 SYNDIG1Q9H7V2 258 aa16.06■□□□□ 0.16
PLOD3-216ENST00000489927 ZSCAN5CA6NGD5 496 aaPredicted RBP16.05■□□□□ 0.16
PLOD3-216ENST00000489927 K7ENP7 123 aa16.05■□□□□ 0.16
PLOD3-216ENST00000489927 TOR1BO14657 336 aa16.05■□□□□ 0.16
PLOD3-216ENST00000489927 IGSF6O95976 241 aa16.05■□□□□ 0.16
PLOD3-216ENST00000489927 RAD51Q06609 339 aa16.05■□□□□ 0.16
PLOD3-216ENST00000489927 IRF4Q15306 451 aa16.05■□□□□ 0.16
PLOD3-216ENST00000489927 TCP11X2Q5H9J9 407 aa16.05■□□□□ 0.16
PLOD3-216ENST00000489927 KIAA1614Q5VZ46 1190 aa16.05■□□□□ 0.16
PLOD3-216ENST00000489927 INO80CQ6PI98 192 aaPredicted RBP16.05■□□□□ 0.16
PLOD3-216ENST00000489927 CLEC14AQ86T13 490 aa16.05■□□□□ 0.16
PLOD3-216ENST00000489927 NTAN1Q96AB6 310 aa16.05■□□□□ 0.16
PLOD3-216ENST00000489927 KLC2Q9H0B6 622 aa16.05■□□□□ 0.16
PLOD3-216ENST00000489927 GANQ9H2C0 597 aa16.05■□□□□ 0.16
PLOD3-216ENST00000489927 CLSTN2Q9H4D0 955 aa16.05■□□□□ 0.16
PLOD3-216ENST00000489927 DKK3Q9UBP4 350 aa16.05■□□□□ 0.16
PLOD3-216ENST00000489927 GULP1Q9UBP9 304 aa16.05■□□□□ 0.16
PLOD3-216ENST00000489927 MFHAS1Q9Y4C4 1052 aa16.05■□□□□ 0.16
PLOD3-216ENST00000489927 CCDC187A0A096LP49 1063 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 NTN3O00634 580 aaPredicted RBP16.04■□□□□ 0.16
PLOD3-216ENST00000489927 INSIG1O15503 277 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 ITGA2BP08514 1039 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 KRT3P12035 628 aa16.04■□□□□ 0.16
PLOD3-216ENST00000489927 RFC1P35251 1148 aaPredicted RBP16.04■□□□□ 0.16
PLOD3-216ENST00000489927 MLLT3P42568 568 aaPredicted RBP16.04■□□□□ 0.16
PLOD3-216ENST00000489927 KLK7P49862 253 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms