RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 ECHDC3Q96DC8 303 aa16.26■□□□□ 0.19
CLIC4-203ENST00000489758 SIPA1Q96FS4 1042 aa16.26■□□□□ 0.19
CLIC4-203ENST00000489758 KRT12Q99456 494 aa16.26■□□□□ 0.19
CLIC4-203ENST00000489758 MLPHQ9BV36 600 aaPredicted RBP16.26■□□□□ 0.19
CLIC4-203ENST00000489758 PABPC3Q9H361 631 aaKnown RBP16.26■□□□□ 0.19
CLIC4-203ENST00000489758 SUV39H2Q9H5I1 410 aa16.26■□□□□ 0.19
CLIC4-203ENST00000489758 L2HGDHQ9H9P8 463 aa16.26■□□□□ 0.19
CLIC4-203ENST00000489758 PCDH9Q9HC56 1237 aa16.26■□□□□ 0.19
CLIC4-203ENST00000489758 RAI2Q9Y5P3 530 aa16.26■□□□□ 0.19
CLIC4-203ENST00000489758 NUP205Q92621 2012 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 C1QTNF3-AMACRE9PGA6 284 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 KPNA3O00505 521 aaPredicted RBP16.25■□□□□ 0.19
CLIC4-203ENST00000489758 LAMTOR5O43504 91 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 FZD6O60353 706 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 SOCS5O75159 536 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 ALDH1A2O94788 518 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 KRT14P02533 472 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 SERPINF2P08697 491 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 C5AR1P21730 350 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 ITGB7P26010 798 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 SERPINA4P29622 427 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 DRD3P35462 400 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 PXNP49023 591 aaPredicted RBP16.25■□□□□ 0.19
CLIC4-203ENST00000489758 BCL2L1Q07817 233 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 POM121L1PQ3SYA9 428 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 ZNF805Q5CZA5 627 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 FAM46CQ5VWP2 391 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 TSSK4Q6SA08 328 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 ZSWIM9Q86XI8 627 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 GRK7Q8WTQ7 553 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 SPOCK2Q92563 424 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 KLHL32Q96NJ5 620 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 RUNDC3BQ96NL0 473 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 TDRD1Q9BXT4 1180 aaKnown RBP16.25■□□□□ 0.19
CLIC4-203ENST00000489758 CD93Q9NPY3 652 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 UBP1Q9NZI7 540 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 USP36Q9P275 1121 aaKnown RBP16.25■□□□□ 0.19
CLIC4-203ENST00000489758 PAK5Q9P286 719 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 DKK3Q9UBP4 350 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 SERGEFQ9UGK8 458 aa16.25■□□□□ 0.19
CLIC4-203ENST00000489758 FEZ2Q9UHY8 353 aaPredicted RBP16.25■□□□□ 0.19
CLIC4-203ENST00000489758 PLK4O00444 970 aa16.24■□□□□ 0.19
CLIC4-203ENST00000489758 PRLP01236 227 aa16.24■□□□□ 0.19
CLIC4-203ENST00000489758 IGLV3-19P01714 112 aa16.24■□□□□ 0.19
CLIC4-203ENST00000489758 DR1Q01658 176 aa16.24■□□□□ 0.19
CLIC4-203ENST00000489758 PTK6Q13882 451 aa16.24■□□□□ 0.19
CLIC4-203ENST00000489758 TRIP13Q15645 432 aaPredicted RBP16.24■□□□□ 0.19
CLIC4-203ENST00000489758 DNTTIP2Q5QJE6 756 aaKnown RBP16.24■□□□□ 0.19
CLIC4-203ENST00000489758 FAXCQ5TGI0 409 aa16.24■□□□□ 0.19
CLIC4-203ENST00000489758 KCTD11Q693B1 232 aa16.24■□□□□ 0.19
CLIC4-203ENST00000489758 KIAA1324Q6UXG2 1013 aaKnown RBP16.24■□□□□ 0.19
CLIC4-203ENST00000489758 PARS2Q7L3T8 475 aaKnown RBP16.24■□□□□ 0.19
CLIC4-203ENST00000489758 HCAR2Q8TDS4 363 aa16.24■□□□□ 0.19
CLIC4-203ENST00000489758 TRIB3Q96RU7 358 aa16.24■□□□□ 0.19
CLIC4-203ENST00000489758 HDAC8Q9BY41 377 aa16.24■□□□□ 0.19
CLIC4-203ENST00000489758 ITM2CQ9NQX7 267 aa16.24■□□□□ 0.19
CLIC4-203ENST00000489758 VPS45Q9NRW7 570 aa16.24■□□□□ 0.19
CLIC4-203ENST00000489758 BCCIPQ9P287 314 aaKnown RBP eCLIP16.24■□□□□ 0.19
CLIC4-203ENST00000489758 FAM153AQ9UHL3 310 aa16.24■□□□□ 0.19
CLIC4-203ENST00000489758 SCML1Q9UN30 329 aa16.24■□□□□ 0.19
CLIC4-203ENST00000489758 CKAP5Q14008 2032 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.23■□□□□ 0.19
CLIC4-203ENST00000489758 A0A1W2PP55 124 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 C16orf96A6NNT2 1141 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 ANXA9O76027 345 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 PGLSO95336 258 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 GAS8O95995 478 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 DNTTP04053 509 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 PDHA1P08559 390 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 P2RY2P41231 377 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 TPMTP51580 245 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 WNT3AP56704 352 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 NHLH1Q02575 133 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 CNTN1Q12860 1018 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 MPP3Q13368 585 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 SEMA5AQ13591 1074 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 DHX34Q14147 1143 aaKnown RBP16.23■□□□□ 0.19
CLIC4-203ENST00000489758 PIP5KL1Q5T9C9 394 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 AGBL4Q5VU57 503 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 BRAT1Q6PJG6 821 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 C4orf22Q6V702 233 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 SYDE1Q6ZW31 735 aaPredicted RBP16.23■□□□□ 0.19
CLIC4-203ENST00000489758 USP30Q70CQ3 517 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 JAMLQ86YT9 394 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 PGBD3Q8N328 593 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 TAB3Q8N5C8 712 aaPredicted RBP16.23■□□□□ 0.19
CLIC4-203ENST00000489758 MNS1Q8NEH6 495 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 PIH1D2Q8WWB5 315 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 PPP1R16AQ96I34 528 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 MRGPRX2Q96LB1 330 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 PPP1R2P1Q96PQ5 205 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 ETNK1Q9HBU6 452 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 RAB6BQ9NRW1 208 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 FBXO4Q9UKT5 387 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 CHKBQ9Y259 395 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 AAR2Q9Y312 384 aaKnown RBP16.23■□□□□ 0.19
CLIC4-203ENST00000489758 PCDHB9Q9Y5E1 797 aa16.23■□□□□ 0.19
CLIC4-203ENST00000489758 CCDC163A0A0D9SF12 145 aa16.22■□□□□ 0.19
CLIC4-203ENST00000489758 LOC285095A0A1B0GVY8 99 aa16.22■□□□□ 0.19
CLIC4-203ENST00000489758 TTI1O43156 1089 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms