RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 KLHL32Q96NJ5 620 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 VAT1Q99536 393 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 IL12RB2Q99665 862 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 FERMT1Q9BQL6 677 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 ZDHHC5Q9C0B5 715 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 SUV39H2Q9H5I1 410 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 C6orf106Q9H6K1 298 aaPredicted RBP11.2□□□□□ -0.62
CPSF7-212ENST00000489728 SCUBE2Q9NQ36 999 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 SEMA4GQ9NTN9 838 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 FADS3Q9Y5Q0 445 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 FAM186AA6NE01 2351 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 ZNF292O60281 2723 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 DMDP11532 3685 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 SHROOM3Q8TF72 1996 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 GVINP1Q7Z2Y8 2422 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 TBC1D3DA0A087WVF3 549 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 TBC1D3IA0A087WXS9 549 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 TBC1D3EA0A087X179 549 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 TBC1D3KA0A087X1G2 549 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 A0A1B0GTW7 788 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 A0A1W2PPC4 97 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 GOLGA6L9A6NEM1 432 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 TBC1D3FA6NER0 549 aaPredicted RBP11.19□□□□□ -0.62
CPSF7-212ENST00000489728 UPK3BL1B0FP48 263 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 TBC1D3LB9A6J9 549 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 UPK3BL2E5RIL1 263 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 TRAFD1O14545 582 aaPredicted RBP11.19□□□□□ -0.62
CPSF7-212ENST00000489728 AREL1O15033 823 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 KHNYNO15037 678 aaKnown RBP11.19□□□□□ -0.62
CPSF7-212ENST00000489728 HTRA2O43464 458 aaPredicted RBP11.19□□□□□ -0.62
CPSF7-212ENST00000489728 RNGTTO60942 597 aaKnown RBP11.19□□□□□ -0.62
CPSF7-212ENST00000489728 FSBPO95073 299 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 SERPINF2P08697 491 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 TBC1D3HP0C7X1 549 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 PYGMP11217 842 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 PECAM1P16284 738 aaPredicted RBP11.19□□□□□ -0.62
CPSF7-212ENST00000489728 TGM1P22735 817 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 MSNP26038 577 aaKnown RBP11.19□□□□□ -0.62
CPSF7-212ENST00000489728 SCNN1BP51168 640 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 AFF3P51826 1226 aaKnown RBP11.19□□□□□ -0.62
CPSF7-212ENST00000489728 RPS21P63220 83 aaKnown RBP11.19□□□□□ -0.62
CPSF7-212ENST00000489728 SPEM2Q0P670 501 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 AP1B1Q10567 949 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 NOMO1Q15155 1222 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 POM121L1PQ3SYA9 428 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 TMEM259Q4ZIN3 620 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 SETMARQ53H47 684 aaPredicted RBP11.19□□□□□ -0.62
CPSF7-212ENST00000489728 MEI1Q5TIA1 1274 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 CCDC181Q5TID7 509 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 TBC1D3GQ6DHY5 549 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 TBC1D3CQ6IPX1 549 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 ERAP2Q6P179 960 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 PRR23CQ6ZRP0 262 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 ARMCX6Q7L4S7 300 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 PRPF39Q86UA1 669 aaKnown RBP11.19□□□□□ -0.62
CPSF7-212ENST00000489728 ALYREFQ86V81 257 aaKnown RBP11.19□□□□□ -0.62
CPSF7-212ENST00000489728 HORMAD1Q86X24 394 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 RGL4Q8IZJ4 473 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 TBC1D3Q8IZP1 549 aaPredicted RBP11.19□□□□□ -0.62
CPSF7-212ENST00000489728 PGBD5Q8N414 524 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 C1orf216Q8TAB5 229 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 FAM174AQ8TBP5 190 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 PIGKQ92643 395 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 HAUS1Q96CS2 278 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 QKIQ96PU8 341 aaKnown RBP eCLIP11.19□□□□□ -0.62
CPSF7-212ENST00000489728 LGMNQ99538 433 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 NUSAP1Q9BXS6 441 aaKnown RBP11.19□□□□□ -0.62
CPSF7-212ENST00000489728 CARD9Q9H257 536 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 KCNF1Q9H3M0 494 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 NT5MQ9NPB1 228 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 RBM22Q9NW64 420 aaKnown RBP eCLIP11.19□□□□□ -0.621e-6■■■■□ 23.9
CPSF7-212ENST00000489728 ATP8A1Q9Y2Q0 1164 aa11.19□□□□□ -0.62
CPSF7-212ENST00000489728 RIF1Q5UIP0 2472 aaKnown RBP11.19□□□□□ -0.62
CPSF7-212ENST00000489728 CFAP69A5D8W1 941 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 FAM47DPA6NHR8 397 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 RNF103O00237 685 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 BCAT2O15382 392 aaPredicted RBP11.18□□□□□ -0.62
CPSF7-212ENST00000489728 MAP3K6O95382 1288 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 PIGNO95427 931 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 SDHBP21912 280 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 XPAP23025 273 aaPredicted RBP11.18□□□□□ -0.62
CPSF7-212ENST00000489728 GKP32189 559 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 GRIA4P48058 902 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 RPL26P61254 145 aaKnown RBP11.18□□□□□ -0.62
CPSF7-212ENST00000489728 RACK1P63244 317 aaKnown RBP11.18□□□□□ -0.62
CPSF7-212ENST00000489728 ARHGAP8P85298 464 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 ADCY2Q08462 1091 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 OVGP1Q12889 678 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 KLF1Q13351 362 aaPredicted RBP11.18□□□□□ -0.62
CPSF7-212ENST00000489728 RPS6KA1Q15418 735 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 TEAD4Q15561 434 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 UGP2Q16851 508 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 SLC45A4Q5BKX6 768 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 SEL1L2Q5TEA6 688 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 NAPEPLDQ6IQ20 393 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 NPNTQ6UXI9 565 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 IQCHQ86VS3 1027 aa11.18□□□□□ -0.62
CPSF7-212ENST00000489728 CDKL3Q8IVW4 592 aaPredicted RBP11.18□□□□□ -0.62
CPSF7-212ENST00000489728 C12orf50Q8NA57 414 aaPredicted RBP11.18□□□□□ -0.62
CPSF7-212ENST00000489728 SKA1Q96BD8 255 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms