RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 C19orf57Q0VDD7 668 aa18.66■□□□□ 0.58
HDAC6-231ENST00000488905 PTK2BQ14289 1009 aa18.66■□□□□ 0.58
HDAC6-231ENST00000488905 ISXQ2M1V0 245 aa18.66■□□□□ 0.58
HDAC6-231ENST00000488905 FKBP15Q5T1M5 1219 aa18.66■□□□□ 0.58
HDAC6-231ENST00000488905 PHACTR4Q8IZ21 702 aa18.66■□□□□ 0.58
HDAC6-231ENST00000488905 RTL3Q8N8U3 475 aaKnown RBP18.66■□□□□ 0.58
HDAC6-231ENST00000488905 C3orf20Q8ND61 904 aa18.66■□□□□ 0.58
HDAC6-231ENST00000488905 ENOX1Q8TC92 643 aaKnown RBP18.66■□□□□ 0.58
HDAC6-231ENST00000488905 CXorf40AQ8TE69 158 aa18.66■□□□□ 0.58
HDAC6-231ENST00000488905 CASKIN2Q8WXE0 1202 aa18.66■□□□□ 0.58
HDAC6-231ENST00000488905 TBATAQ96M53 351 aa18.66■□□□□ 0.58
HDAC6-231ENST00000488905 PCDHB18PQ96TA0 734 aa18.66■□□□□ 0.58
HDAC6-231ENST00000488905 LRRC61Q9BV99 259 aa18.66■□□□□ 0.58
HDAC6-231ENST00000488905 SELENOOQ9BVL4 669 aa18.66■□□□□ 0.58
HDAC6-231ENST00000488905 BOCQ9BWV1 1114 aa18.66■□□□□ 0.58
HDAC6-231ENST00000488905 TTYH3Q9C0H2 523 aa18.66■□□□□ 0.58
HDAC6-231ENST00000488905 TCEAL2Q9H3H9 227 aaPredicted RBP18.66■□□□□ 0.58
HDAC6-231ENST00000488905 NOL6Q9H6R4 1146 aaKnown RBP18.66■□□□□ 0.58
HDAC6-231ENST00000488905 ASCL3Q9NQ33 180 aa18.66■□□□□ 0.58
HDAC6-231ENST00000488905 SPASTQ9UBP0 616 aa18.66■□□□□ 0.58
HDAC6-231ENST00000488905 PNMA8BQ9ULN7 279 aaPredicted RBP18.66■□□□□ 0.58
HDAC6-231ENST00000488905 SIK3Q9Y2K2 1263 aa18.66■□□□□ 0.58
HDAC6-231ENST00000488905 TM7SF2O76062 418 aa18.65■□□□□ 0.58
HDAC6-231ENST00000488905 CALB1P05937 261 aa18.65■□□□□ 0.58
HDAC6-231ENST00000488905 EPHB2P29323 1055 aa18.65■□□□□ 0.58
HDAC6-231ENST00000488905 STAT1P42224 750 aa18.65■□□□□ 0.58
HDAC6-231ENST00000488905 RHOAP61586 193 aa18.65■□□□□ 0.58
HDAC6-231ENST00000488905 YPEL5P62699 121 aa18.65■□□□□ 0.58
HDAC6-231ENST00000488905 RAD51Q06609 339 aa18.65■□□□□ 0.58
HDAC6-231ENST00000488905 NR0B2Q15466 257 aa18.65■□□□□ 0.58
HDAC6-231ENST00000488905 CLEC16AQ2KHT3 1053 aa18.65■□□□□ 0.58
HDAC6-231ENST00000488905 PRRT3Q5FWE3 981 aa18.65■□□□□ 0.58
HDAC6-231ENST00000488905 C3orf38Q5JPI3 329 aa18.65■□□□□ 0.58
HDAC6-231ENST00000488905 EFHC2Q5JST6 749 aa18.65■□□□□ 0.58
HDAC6-231ENST00000488905 MACC1Q6ZN28 852 aa18.65■□□□□ 0.58
HDAC6-231ENST00000488905 SLFN11Q7Z7L1 901 aa18.65■□□□□ 0.58
HDAC6-231ENST00000488905 TTC7BQ86TV6 843 aa18.65■□□□□ 0.58
HDAC6-231ENST00000488905 PHF13Q86YI8 300 aaPredicted RBP18.65■□□□□ 0.58
HDAC6-231ENST00000488905 PYROXD2Q8N2H3 581 aa18.65■□□□□ 0.58
HDAC6-231ENST00000488905 EPAS1Q99814 870 aa18.65■□□□□ 0.58
HDAC6-231ENST00000488905 C1QTNF7Q9BXJ2 289 aa18.65■□□□□ 0.58
HDAC6-231ENST00000488905 THSD1Q9NS62 852 aa18.65■□□□□ 0.58
HDAC6-231ENST00000488905 SATB2Q9UPW6 733 aa18.65■□□□□ 0.58
HDAC6-231ENST00000488905 SETXQ7Z333 2677 aaKnown RBP18.65■□□□□ 0.58
HDAC6-231ENST00000488905 TOR1BO14657 336 aa18.64■□□□□ 0.57
HDAC6-231ENST00000488905 CCP110O43303 1012 aa18.64■□□□□ 0.57
HDAC6-231ENST00000488905 MMP20O60882 483 aa18.64■□□□□ 0.57
HDAC6-231ENST00000488905 GCATO75600 419 aa18.64■□□□□ 0.57
HDAC6-231ENST00000488905 UCNP55089 124 aa18.64■□□□□ 0.57
HDAC6-231ENST00000488905 TMPRSS3P57727 454 aa18.64■□□□□ 0.57
HDAC6-231ENST00000488905 INO80DQ53TQ3 878 aaPredicted RBP18.64■□□□□ 0.57
HDAC6-231ENST00000488905 C6orf132Q5T0Z8 1188 aa18.64■□□□□ 0.57
HDAC6-231ENST00000488905 BROXQ5VW32 411 aa18.64■□□□□ 0.57
HDAC6-231ENST00000488905 WDR59Q6PJI9 974 aa18.64■□□□□ 0.57
HDAC6-231ENST00000488905 IGF2-ASQ6U949 168 aa18.64■□□□□ 0.57
HDAC6-231ENST00000488905 CRTC1Q6UUV9 634 aa18.64■□□□□ 0.57
HDAC6-231ENST00000488905 RBM44Q6ZP01 1051 aaKnown RBP18.64■□□□□ 0.57
HDAC6-231ENST00000488905 MON1BQ7L1V2 547 aa18.64■□□□□ 0.57
HDAC6-231ENST00000488905 SLC35F3Q8IY50 421 aa18.64■□□□□ 0.57
HDAC6-231ENST00000488905 TP53I13Q8NBR0 393 aaPredicted RBP18.64■□□□□ 0.57
HDAC6-231ENST00000488905 NETO2Q8NC67 525 aa18.64■□□□□ 0.57
HDAC6-231ENST00000488905 TPCN2Q8NHX9 752 aa18.64■□□□□ 0.57
HDAC6-231ENST00000488905 KCNE4Q8WWG9 221 aa18.64■□□□□ 0.57
HDAC6-231ENST00000488905 GLMNQ92990 594 aa18.64■□□□□ 0.57
HDAC6-231ENST00000488905 HMCESQ96FZ2 354 aa18.64■□□□□ 0.57
HDAC6-231ENST00000488905 WRAP53Q9BUR4 548 aaKnown RBP18.64■□□□□ 0.57
HDAC6-231ENST00000488905 SLC13A1Q9BZW2 595 aa18.64■□□□□ 0.57
HDAC6-231ENST00000488905 KLC2Q9H0B6 622 aa18.64■□□□□ 0.57
HDAC6-231ENST00000488905 DKK3Q9UBP4 350 aa18.64■□□□□ 0.57
HDAC6-231ENST00000488905 MFHAS1Q9Y4C4 1052 aa18.64■□□□□ 0.57
HDAC6-231ENST00000488905 A0A1W2PNU3 283 aaPredicted RBP18.63■□□□□ 0.57
HDAC6-231ENST00000488905 LMO7DNF2Z398 122 aa18.63■□□□□ 0.57
HDAC6-231ENST00000488905 MUSKO15146 869 aa18.63■□□□□ 0.57
HDAC6-231ENST00000488905 TCEA3O75764 348 aa18.63■□□□□ 0.57
HDAC6-231ENST00000488905 RPIAP49247 311 aa18.63■□□□□ 0.57
HDAC6-231ENST00000488905 C1orf61Q13536 156 aa18.63■□□□□ 0.57
HDAC6-231ENST00000488905 IRF4Q15306 451 aa18.63■□□□□ 0.57
HDAC6-231ENST00000488905 KLHL40Q2TBA0 621 aa18.63■□□□□ 0.57
HDAC6-231ENST00000488905 PARP15Q460N3 678 aa18.63■□□□□ 0.57
HDAC6-231ENST00000488905 PERM1Q5SV97 790 aa18.63■□□□□ 0.57
HDAC6-231ENST00000488905 DNAJC24Q6P3W2 148 aa18.63■□□□□ 0.57
HDAC6-231ENST00000488905 NAT6Q93015 286 aa18.63■□□□□ 0.57
HDAC6-231ENST00000488905 GRAMD1AQ96CP6 724 aa18.63■□□□□ 0.57
HDAC6-231ENST00000488905 ATXN7L3BQ96GX2 97 aa18.63■□□□□ 0.57
HDAC6-231ENST00000488905 VCPIP1Q96JH7 1222 aa18.63■□□□□ 0.57
HDAC6-231ENST00000488905 EXOC2Q96KP1 924 aa18.63■□□□□ 0.57
HDAC6-231ENST00000488905 MBNL1Q9NR56 388 aaKnown RBP18.63■□□□□ 0.57
HDAC6-231ENST00000488905 LHX3Q9UBR4 397 aa18.63■□□□□ 0.57
HDAC6-231ENST00000488905 ENTPD2Q9Y5L3 495 aa18.63■□□□□ 0.57
HDAC6-231ENST00000488905 ASH1LQ9NR48 2969 aaKnown RBP18.63■□□□□ 0.57
HDAC6-231ENST00000488905 SCN8AQ9UQD0 1980 aa18.62■□□□□ 0.57
HDAC6-231ENST00000488905 UNC13CQ8NB66 2214 aa18.62■□□□□ 0.57
HDAC6-231ENST00000488905 TCRBV5S1A1TA0A578 114 aa18.62■□□□□ 0.57
HDAC6-231ENST00000488905 SIGLEC16A6NMB1 481 aa18.62■□□□□ 0.57
HDAC6-231ENST00000488905 RASA4BC9J798 803 aa18.62■□□□□ 0.57
HDAC6-231ENST00000488905 ERVH48-1M5A8F1 160 aa18.62■□□□□ 0.57
HDAC6-231ENST00000488905 RASA4O43374 803 aa18.62■□□□□ 0.57
HDAC6-231ENST00000488905 CREB3O43889 395 aa18.62■□□□□ 0.57
HDAC6-231ENST00000488905 ANXA6P08133 673 aa18.62■□□□□ 0.57
HDAC6-231ENST00000488905 ITIH2P19823 946 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms