RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 CDRT15L2A8MXV6 281 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 DNM1LO00429 736 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 PAPSS1O43252 624 aaPredicted RBP3.71□□□□□ -1.81
HFM1-208ENST00000488023 SPRY2O43597 315 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 EXOC3O60645 756 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 USP12O75317 370 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 NCR1O76036 304 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 TPPPO94811 219 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 NDUFA10O95299 355 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 CHRM4P08173 479 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 CD19P15391 556 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 TRIM21P19474 475 aaKnown RBP3.71□□□□□ -1.81
HFM1-208ENST00000488023 CYP3A7P24462 503 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 HOXC8P31273 242 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 IGHMBP2P38935 993 aaKnown RBP3.71□□□□□ -1.81
HFM1-208ENST00000488023 AVPR1BP47901 424 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 ANXA11P50995 505 aaKnown RBP3.71□□□□□ -1.81
HFM1-208ENST00000488023 RPS6KA3P51812 740 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 DGKQP52824 942 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 SLC12A3P55017 1021 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 F2RL1P55085 397 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 BLOC1S1P78537 153 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 B4GALNT1Q00973 533 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 IKQ13123 557 aaPredicted RBP3.71□□□□□ -1.81
HFM1-208ENST00000488023 SMU1Q2TAY7 513 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 BEAN1Q3B7T3 259 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 CRY2Q49AN0 593 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 GXYLT1Q4G148 440 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 PREPLQ4J6C6 727 aaPredicted RBP3.71□□□□□ -1.81
HFM1-208ENST00000488023 PDCD4Q53EL6 469 aaKnown RBP3.71□□□□□ -1.81
HFM1-208ENST00000488023 NHSL2Q5HYW2 709 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 HECTD2Q5U5R9 776 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 STRIP1Q5VSL9 837 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 SFRP4Q6FHJ7 346 aaPredicted RBP3.71□□□□□ -1.81
HFM1-208ENST00000488023 WDR93Q6P2C0 686 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 GJB7Q6PEY0 223 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 CASC1Q6TDU7 716 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 OLFML1Q6UWY5 402 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 MOB3CQ70IA8 216 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 CAND1Q86VP6 1230 aaKnown RBP3.71□□□□□ -1.81
HFM1-208ENST00000488023 ADGRG5Q8IZF4 528 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 FAM109AQ8N4B1 249 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 C10orf53Q8N6V4 93 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 NOC3LQ8WTT2 800 aaKnown RBP3.71□□□□□ -1.81
HFM1-208ENST00000488023 FAM162AQ96A26 154 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 PPP1R13BQ96KQ4 1090 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 HS6ST2Q96MM7 605 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 ATP6V0BQ99437 205 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 SYT17Q9BSW7 474 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 NPLQ9BXD5 320 aaPredicted RBP3.71□□□□□ -1.81
HFM1-208ENST00000488023 USP29Q9HBJ7 922 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 PFDN4Q9NQP4 134 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 SETD4Q9NVD3 440 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 HPF1Q9NWY4 346 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 UBA2Q9UBT2 640 aaPredicted RBP3.71□□□□□ -1.81
HFM1-208ENST00000488023 CTNNAL1Q9UBT7 734 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 CNOT8Q9UFF9 292 aaKnown RBP3.71□□□□□ -1.81
HFM1-208ENST00000488023 SEC63Q9UGP8 760 aaKnown RBP3.71□□□□□ -1.81
HFM1-208ENST00000488023 ATP6V0A2Q9Y487 856 aa3.71□□□□□ -1.81
HFM1-208ENST00000488023 KRT87PA6NCN2 255 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 OR6C76A6NM76 312 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 WDR46O15213 610 aaKnown RBP3.71□□□□□ -1.82
HFM1-208ENST00000488023 PENKP01210 267 aaPredicted RBP3.71□□□□□ -1.82
HFM1-208ENST00000488023 ALDOAP04075 364 aaKnown RBP3.71□□□□□ -1.82
HFM1-208ENST00000488023 PTPN2P17706 415 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 CD38P28907 300 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 TNFRSF8P28908 595 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 PIP4K2AP48426 406 aaPredicted RBP3.71□□□□□ -1.82
HFM1-208ENST00000488023 CLK3P49761 638 aaKnown RBP3.71□□□□□ -1.82
HFM1-208ENST00000488023 CAMPP49913 170 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 GALCP54803 685 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 GUCY1B3Q02153 619 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 TUBB3Q13509 450 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 GRAPQ13588 217 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 DYRK1AQ13627 763 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 PTK6Q13882 451 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 BAATQ14032 418 aaPredicted RBP3.71□□□□□ -1.82
HFM1-208ENST00000488023 HYAL4Q2M3T9 481 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 ZSCAN23Q3MJ62 389 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 LEXMQ3ZCV2 418 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 JADE1Q6IE81 842 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 TADA2BQ86TJ2 420 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 SIX6OS1Q8N1H7 587 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 LCORLQ8N3X6 602 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 CPXM2Q8N436 756 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 MINDY1Q8N5J2 469 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.71□□□□□ -1.823e-10■■■■■ 27.5
HFM1-208ENST00000488023 SETD9Q8NE22 299 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 CPEB3Q8NE35 698 aaKnown RBP3.71□□□□□ -1.82
HFM1-208ENST00000488023 OR56A1Q8NGH5 318 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 TAF4BQ92750 862 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 GLG1Q92896 1179 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 TMEM125Q96AQ2 219 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 PTERQ96BW5 349 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 PABPC5Q96DU9 382 aaKnown RBP3.71□□□□□ -1.82
HFM1-208ENST00000488023 WDR11Q9BZH6 1224 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 REXO4Q9GZR2 422 aaKnown RBP3.71□□□□□ -1.82
HFM1-208ENST00000488023 TOR3AQ9H497 397 aa3.71□□□□□ -1.82
HFM1-208ENST00000488023 PLK3Q9H4B4 646 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms