RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 NCSTNQ92542 709 aa4.31□□□□□ -1.72
SMC4-219ENST00000487747 GOLGA1Q92805 767 aa4.31□□□□□ -1.72
SMC4-219ENST00000487747 MMP28Q9H239 520 aa4.31□□□□□ -1.72
SMC4-219ENST00000487747 UBTD1Q9HAC8 227 aa4.31□□□□□ -1.72
SMC4-219ENST00000487747 GRHPRQ9UBQ7 328 aa4.31□□□□□ -1.72
SMC4-219ENST00000487747 SNX9Q9Y5X1 595 aa4.31□□□□□ -1.72
SMC4-219ENST00000487747 CPED1A4D0V7 1026 aa4.3□□□□□ -1.72
SMC4-219ENST00000487747 IPO5O00410 1097 aaKnown RBP4.3□□□□□ -1.72
SMC4-219ENST00000487747 SERPINC1P01008 464 aa4.3□□□□□ -1.72
SMC4-219ENST00000487747 MYF6P23409 242 aa4.3□□□□□ -1.72
SMC4-219ENST00000487747 CENPAP49450 140 aa4.3□□□□□ -1.72
SMC4-219ENST00000487747 ARSFP54793 590 aa4.3□□□□□ -1.72
SMC4-219ENST00000487747 ICA1Q05084 483 aa4.3□□□□□ -1.72
SMC4-219ENST00000487747 ZBTB17Q13105 803 aa4.3□□□□□ -1.72
SMC4-219ENST00000487747 CUL4BQ13620 913 aa4.3□□□□□ -1.72
SMC4-219ENST00000487747 CALCRLQ16602 461 aa4.3□□□□□ -1.72
SMC4-219ENST00000487747 TIGD6Q17RP2 521 aa4.3□□□□□ -1.72
SMC4-219ENST00000487747 PLEKHO1Q53GL0 409 aaPredicted RBP4.3□□□□□ -1.72
SMC4-219ENST00000487747 SATL1Q86VE3 508 aa4.3□□□□□ -1.72
SMC4-219ENST00000487747 KLHDC8BQ8IXV7 354 aa4.3□□□□□ -1.72
SMC4-219ENST00000487747 OR6Y1Q8NGX8 325 aa4.3□□□□□ -1.72
SMC4-219ENST00000487747 SVIPQ8NHG7 77 aa4.3□□□□□ -1.72
SMC4-219ENST00000487747 RNF183Q96D59 192 aa4.3□□□□□ -1.72
SMC4-219ENST00000487747 RNFT2Q96EX2 444 aa4.3□□□□□ -1.72
SMC4-219ENST00000487747 MASTLQ96GX5 879 aa4.3□□□□□ -1.72
SMC4-219ENST00000487747 RBM17Q96I25 401 aaKnown RBP4.3□□□□□ -1.72
SMC4-219ENST00000487747 ZNF385AQ96PM9 386 aaKnown RBP4.3□□□□□ -1.72
SMC4-219ENST00000487747 ZNF711Q9Y462 761 aa4.3□□□□□ -1.72
SMC4-219ENST00000487747 ABHD14A-ACY1A0A1B0GW23 586 aa4.29□□□□□ -1.72
SMC4-219ENST00000487747 SEPT4O43236 478 aa4.29□□□□□ -1.72
SMC4-219ENST00000487747 HSPA12AO43301 675 aa4.29□□□□□ -1.72
SMC4-219ENST00000487747 CSTBP04080 98 aaKnown RBP4.29□□□□□ -1.72
SMC4-219ENST00000487747 IFIT2P09913 472 aaKnown RBP4.29□□□□□ -1.72
SMC4-219ENST00000487747 CST5P28325 142 aaPredicted RBP4.29□□□□□ -1.72
SMC4-219ENST00000487747 HNF1BP35680 557 aa4.29□□□□□ -1.72
SMC4-219ENST00000487747 HIST2H2BCQ6DN03 193 aa4.29□□□□□ -1.72
SMC4-219ENST00000487747 ADAM5Q6NVV9 412 aa4.29□□□□□ -1.72
SMC4-219ENST00000487747 JMJD6Q6NYC1 403 aaPredicted RBP4.29□□□□□ -1.72
SMC4-219ENST00000487747 KLHL24Q6TFL4 600 aa4.29□□□□□ -1.72
SMC4-219ENST00000487747 FOXL2NBQ6ZUU3 175 aa4.29□□□□□ -1.72
SMC4-219ENST00000487747 TOGARAM2Q6ZUX3 1019 aa4.29□□□□□ -1.72
SMC4-219ENST00000487747 MAB21L3Q8N8X9 362 aa4.29□□□□□ -1.72
SMC4-219ENST00000487747 MTBPQ96DY7 904 aa4.29□□□□□ -1.72
SMC4-219ENST00000487747 LRFN5Q96NI6 719 aa4.29□□□□□ -1.72
SMC4-219ENST00000487747 UHRF2Q96PU4 802 aa4.29□□□□□ -1.72
SMC4-219ENST00000487747 CHODLQ9H9P2 273 aa4.29□□□□□ -1.72
SMC4-219ENST00000487747 PTPRHQ9HD43 1115 aa4.29□□□□□ -1.72
SMC4-219ENST00000487747 SCRT2Q9NQ03 307 aa4.29□□□□□ -1.72
SMC4-219ENST00000487747 TAF1P21675 1872 aa4.28□□□□□ -1.72
SMC4-219ENST00000487747 ADGRF5Q8IZF2 1346 aa4.28□□□□□ -1.72
SMC4-219ENST00000487747 HBP1O60381 514 aa4.28□□□□□ -1.72
SMC4-219ENST00000487747 LINC00271P0C7V0 271 aa4.28□□□□□ -1.72
SMC4-219ENST00000487747 DHRS4L1P0CG22 281 aa4.28□□□□□ -1.72
SMC4-219ENST00000487747 DMP1Q13316 513 aaPredicted RBP4.28□□□□□ -1.72
SMC4-219ENST00000487747 DCAF6Q58WW2 860 aa4.28□□□□□ -1.72
SMC4-219ENST00000487747 PAPPA-AS1Q5QFB9 102 aa4.28□□□□□ -1.72
SMC4-219ENST00000487747 GHDCQ8N2G8 530 aa4.28□□□□□ -1.72
SMC4-219ENST00000487747 SPATA22Q8NHS9 363 aa4.28□□□□□ -1.72
SMC4-219ENST00000487747 CCDC136Q96JN2 1154 aa4.28□□□□□ -1.72
SMC4-219ENST00000487747 C3orf30Q96M34 536 aa4.28□□□□□ -1.72
SMC4-219ENST00000487747 EBF2Q9HAK2 575 aa4.28□□□□□ -1.72
SMC4-219ENST00000487747 ANKRD10Q9NXR5 420 aa4.28□□□□□ -1.72
SMC4-219ENST00000487747 CD207Q9UJ71 328 aa4.28□□□□□ -1.72
SMC4-219ENST00000487747 KCNS2Q9ULS6 477 aa4.28□□□□□ -1.72
SMC4-219ENST00000487747 GAB2Q9UQC2 676 aa4.28□□□□□ -1.72
SMC4-219ENST00000487747 PAM16Q9Y3D7 125 aa4.28□□□□□ -1.72
SMC4-219ENST00000487747 ZNF587BE7ETH6 402 aa4.27□□□□□ -1.73
SMC4-219ENST00000487747 STX16-NPEPL1H3BU86 382 aa4.27□□□□□ -1.73
SMC4-219ENST00000487747 STX16O14662 325 aa4.27□□□□□ -1.73
SMC4-219ENST00000487747 ZG16O60844 167 aa4.27□□□□□ -1.73
SMC4-219ENST00000487747 RGS11O94810 467 aa4.27□□□□□ -1.73
SMC4-219ENST00000487747 CRYAAP02489 173 aa4.27□□□□□ -1.73
SMC4-219ENST00000487747 LIFRP42702 1097 aa4.27□□□□□ -1.73
SMC4-219ENST00000487747 ZNF155Q12901 538 aaPredicted RBP4.27□□□□□ -1.73
SMC4-219ENST00000487747 EFNB3Q15768 340 aa4.27□□□□□ -1.73
SMC4-219ENST00000487747 PMS2CLQ68D20 193 aa4.27□□□□□ -1.73
SMC4-219ENST00000487747 GDPD4Q6W3E5 623 aa4.27□□□□□ -1.73
SMC4-219ENST00000487747 SHFQ7M4L6 423 aa4.27□□□□□ -1.73
SMC4-219ENST00000487747 ZC3HC1Q86WB0 502 aaKnown RBP4.27□□□□□ -1.73
SMC4-219ENST00000487747 LRRC8CQ8TDW0 803 aa4.27□□□□□ -1.73
SMC4-219ENST00000487747 CREB3L4Q8TEY5 395 aa4.27□□□□□ -1.73
SMC4-219ENST00000487747 WBP2Q969T9 261 aa4.27□□□□□ -1.73
SMC4-219ENST00000487747 OR1F2PQ96R84 312 aa4.27□□□□□ -1.73
SMC4-219ENST00000487747 SPATS2LQ9NUQ6 558 aaKnown RBP4.27□□□□□ -1.73
SMC4-219ENST00000487747 SMARCAL1Q9NZC9 954 aa4.27□□□□□ -1.73
SMC4-219ENST00000487747 NDRG3Q9UGV2 375 aa4.27□□□□□ -1.73
SMC4-219ENST00000487747 SLCO3A1Q9UIG8 710 aa4.27□□□□□ -1.73
SMC4-219ENST00000487747 DHX16O60231 1041 aaKnown RBP4.26□□□□□ -1.73
SMC4-219ENST00000487747 ZIC3O60481 467 aa4.26□□□□□ -1.73
SMC4-219ENST00000487747 ATP2C2O75185 946 aa4.26□□□□□ -1.73
SMC4-219ENST00000487747 TFPIP10646 304 aa4.26□□□□□ -1.73
SMC4-219ENST00000487747 VEGFAP15692 232 aaPredicted RBP4.26□□□□□ -1.73
SMC4-219ENST00000487747 SRD5A1P18405 259 aa4.26□□□□□ -1.73
SMC4-219ENST00000487747 KCNA5P22460 613 aa4.26□□□□□ -1.73
SMC4-219ENST00000487747 CLCN3P51790 818 aa4.26□□□□□ -1.73
SMC4-219ENST00000487747 FUT6P51993 359 aa4.26□□□□□ -1.73
SMC4-219ENST00000487747 FOXO1Q12778 655 aa4.26□□□□□ -1.73
SMC4-219ENST00000487747 TROAPQ12815 778 aa4.26□□□□□ -1.73
SMC4-219ENST00000487747 SLC18A3Q16572 532 aa4.26□□□□□ -1.73
SMC4-219ENST00000487747 HSP90AB2PQ58FF8 381 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms