RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 FAM83HQ6ZRV2 1179 aaPredicted RBP5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 CNGA4Q8IV77 575 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 KIAA2013Q8IYS2 634 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 CADM3Q8N126 398 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 SLC25A41Q8N5S1 370 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 CCDC89Q8N998 374 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 LRRC57Q8N9N7 239 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 RSRC1Q96IZ7 334 aaKnown RBP5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 TUBB6Q9BUF5 446 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 NUF2Q9BZD4 464 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 WDR6Q9NNW5 1121 aaKnown RBP5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 PNRC2Q9NPJ4 139 aaKnown RBP5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 ADARB2Q9NS39 739 aaKnown RBP5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 TMEM184CQ9NVA4 438 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 TBC1D29Q9UFV1 150 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 VPS28Q9UK41 221 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 RAP2CQ9Y3L5 183 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 RABGAP1Q9Y3P9 1069 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 COX11Q9Y6N1 276 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 C3P01024 1663 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 SUPT6HQ7KZ85 1726 aaKnown RBP5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 LTBP4Q8N2S1 1624 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 ZNF335Q9H4Z2 1342 aaPredicted RBP5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 ATP10BO94823 1461 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 FAM237BA0A1B0GVD1 139 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 LRRC53A6NM62 1247 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 PTGES3LE9PB15 166 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 HSPB6O14558 160 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 KIF1CO43896 1103 aaKnown RBP5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 ZNF8P17098 575 aaPredicted RBP5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 PTPN2P17706 415 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 ALOX12P18054 663 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 HOXD9P28356 352 aaPredicted RBP5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 EPHB2P29323 1055 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 HADHAP40939 763 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 PPP2R5BQ15173 497 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 RNPS1Q15287 305 aaKnown RBP5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 SMTNL2Q2TAL5 461 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 KIAA1614Q5VZ46 1190 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 TXNDC8Q6A555 127 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 CYP20A1Q6UW02 462 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 BRINP3Q76B58 766 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 KDELC2Q7Z4H8 507 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 SERPINA11Q86U17 422 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 LURAP1LQ8IV03 231 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 FAM185AQ8N0U4 392 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 TTC39CQ8N584 583 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 FRMD1Q8N878 549 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 TMEM116Q8NCL8 245 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 DDB2Q92466 427 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 SMARCE1Q969G3 411 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 WDFY2Q96P53 400 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 H2AFJQ9BTM1 129 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 MRIQ9BWK5 157 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 KRTAP9-3Q9BYQ3 159 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 FTOQ9C0B1 505 aaKnown RBP eCLIP5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 PRKRIP1Q9H875 184 aaPredicted RBP5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 SCPEP1Q9HB40 452 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 THSD1Q9NS62 852 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 HCFC1R1Q9NWW0 138 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 NCKIPSDQ9NZQ3 722 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 FLRT1Q9NZU1 646 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 SLCO3A1Q9UIG8 710 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 LYVE1Q9Y5Y7 322 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 HECW1Q76N89 1606 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 ARHGEF12Q9NZN5 1544 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 POGZQ7Z3K3 1410 aa5.22□□□□□ -1.57
PRPF38A-203ENST00000487160 A0A1W2PPC1 479 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 C17orf102A2RUQ5 167 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 LIPT2A6NK58 231 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 TTC36A6NLP5 189 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 LIASO43766 372 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 RBMXL2O75526 392 aaKnown RBP5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 EIF2S1P05198 315 aaKnown RBP5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 IRF1P10914 325 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 RARGP13631 454 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 TTKP33981 857 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 RYKP34925 604 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 RFC1P35251 1148 aaPredicted RBP5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 CENPAP49450 140 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 TMPRSS3P57727 454 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 ID2Q02363 134 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 GAD2Q05329 585 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 RUNX2Q13950 521 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 FRG1Q14331 258 aaKnown RBP5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 HIST2H2ACQ16777 129 aaPredicted RBP5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 KRTAP15-1Q3LI76 137 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 SUPT20HL1Q3ZLR7 823 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 PIK3CD-AS1Q5SR53 167 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 ZKSCAN2Q63HK3 967 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 SLC18B1Q6NT16 456 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 CPLX2Q6PUV4 134 aaKnown RBP5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 YTHDF3Q7Z739 585 aaKnown RBP5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 TBC1D26Q86UD7 250 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 TMC8Q8IU68 726 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 DHX40Q8IX18 779 aaKnown RBP5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 CCDC105Q8IYK2 499 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 SORCS2Q96PQ0 1159 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 BBS4Q96RK4 519 aa5.21□□□□□ -1.58
PRPF38A-203ENST00000487160 NUDT16L1Q9BRJ7 211 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms