RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 GABPB2Q8TAK5 448 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-211ENST00000486901 VPS33AQ96AX1 596 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 ULBP1Q9BZM6 244 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 SPATC1LQ9H0A9 340 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 FAM96AQ9H5X1 160 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 USP3Q9Y6I4 520 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 NCF1BA6NI72 391 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-211ENST00000486901 NCF1CA8MVU1 366 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-211ENST00000486901 ZBTB11O95625 1053 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-211ENST00000486901 CCDC166P0CW27 439 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 NCF1P14598 390 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-211ENST00000486901 VARSP26640 1264 aaKnown RBP12.49□□□□□ -0.41
HSPG2-211ENST00000486901 MATKP42679 507 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 SLC1A2P43004 574 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 SULT2A1Q06520 285 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 GPRIN1Q7Z2K8 1008 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 PATL1Q86TB9 770 aaKnown RBP12.49□□□□□ -0.41
HSPG2-211ENST00000486901 DHFR2Q86XF0 187 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 OR6P1Q8NGX9 317 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 DDI1Q8WTU0 396 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 APBB2Q92870 758 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 EXD2Q9NVH0 621 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 ADM5C9JUS6 153 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 AP1G1O43747 822 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 TSPAN1O60635 241 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 PARNO95453 639 aaKnown RBP12.49□□□□□ -0.41
HSPG2-211ENST00000486901 AP2A1O95782 977 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 ZNF23P17027 643 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 CLCN2P51788 898 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 CDK18Q07002 472 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 INCA1Q0VD86 236 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 PKDCCQ504Y2 493 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 RABL3Q5HYI8 236 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 SLC26A9Q7LBE3 791 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 RETREG3Q86VR2 466 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 FNDC8Q8TC99 324 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 CXorf21Q9HAI6 301 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 NCKIPSDQ9NZQ3 722 aa12.49□□□□□ -0.41
HSPG2-211ENST00000486901 EI24O14681 340 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 C22orf31O95567 290 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 YBX3P16989 372 aaKnown RBP eCLIP12.48□□□□□ -0.418e-11■■■□□ 19.2
HSPG2-211ENST00000486901 KCNC1P48547 511 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 ESRRGP62508 458 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 NSUN2Q08J23 767 aaKnown RBP eCLIP12.48□□□□□ -0.41
HSPG2-211ENST00000486901 ITGADQ13349 1161 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 AARS2Q5JTZ9 985 aaKnown RBP12.48□□□□□ -0.41
HSPG2-211ENST00000486901 PERM1Q5SV97 790 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 OTUD1Q5VV17 481 aaPredicted RBP12.48□□□□□ -0.41
HSPG2-211ENST00000486901 TMEM135Q86UB9 458 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 SPPL2BQ8TCT7 592 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 VPS50Q96JG6 964 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 FAM167AQ96KS9 214 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 TRNAU1APQ9NX07 287 aaKnown RBP12.48□□□□□ -0.41
HSPG2-211ENST00000486901 DUS2Q9NX74 493 aaKnown RBP12.48□□□□□ -0.41
HSPG2-211ENST00000486901 DPYSL4O14531 572 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 TIMM44O43615 452 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 KPNA6O60684 536 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 RECQL4O94761 1208 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 BAIAP3O94812 1187 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 MPOP05164 745 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 MLNP12872 115 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 ELK4P28324 431 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 ICAM3P32942 547 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 LSM3P62310 102 aaKnown RBP12.48□□□□□ -0.41
HSPG2-211ENST00000486901 METTL21CQ5VZV1 264 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 CLEC14AQ86T13 490 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 CUZD1Q86UP6 607 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 CNTD1Q8N815 330 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 ZNF513Q8N8E2 541 aaPredicted RBP12.48□□□□□ -0.41
HSPG2-211ENST00000486901 CATSPER1Q8NEC5 780 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 ANKRD49Q8WVL7 239 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 HDAC11Q96DB2 347 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 ZNF419Q96HQ0 510 aaPredicted RBP12.48□□□□□ -0.41
HSPG2-211ENST00000486901 ZFP42Q96MM3 310 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 TMEM74Q96NL1 305 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 C1QTNF1Q9BXJ1 281 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 MCM3APO60318 1980 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 COL11A1P12107 1806 aaPredicted RBP12.48□□□□□ -0.41
HSPG2-211ENST00000486901 ARID2Q68CP9 1835 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 RGPD3A6NKT7 1758 aaPredicted RBP12.48□□□□□ -0.41
HSPG2-211ENST00000486901 RGPD4Q7Z3J3 1758 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 HUS1O60921 280 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 SOX4Q06945 474 aaPredicted RBP12.48□□□□□ -0.41
HSPG2-211ENST00000486901 DCAF15Q66K64 600 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 ANKRD52Q8NB46 1076 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 SHCBP1Q8NEM2 672 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 ASB9Q96DX5 294 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 NSUN5Q96P11 429 aaKnown RBP12.48□□□□□ -0.41
HSPG2-211ENST00000486901 ADNPQ9H2P0 1102 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 ASB7Q9H672 318 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 CLK4Q9HAZ1 481 aaKnown RBP12.48□□□□□ -0.41
HSPG2-211ENST00000486901 CROTQ9UKG9 612 aa12.48□□□□□ -0.41
HSPG2-211ENST00000486901 ZBBXA8MT70 800 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 TMEM114B3SHH9 223 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 ATP5BP06576 529 aaKnown RBP12.47□□□□□ -0.41
HSPG2-211ENST00000486901 UGT1A1P22309 533 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 UGT1A4P22310 534 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 ALDH4A1P30038 563 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 ATICP31939 592 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 UGT1A3P35503 534 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms