RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 GOLPH3Q9H4A6 298 aa12.6□□□□□ -0.39
HMG20B-211ENST00000486028 SUV39H2Q9H5I1 410 aa12.6□□□□□ -0.39
HMG20B-211ENST00000486028 ATP13A3Q9H7F0 1226 aa12.6□□□□□ -0.39
HMG20B-211ENST00000486028 TM9SF3Q9HD45 589 aa12.6□□□□□ -0.39
HMG20B-211ENST00000486028 TMEM9BQ9NQ34 198 aa12.6□□□□□ -0.39
HMG20B-211ENST00000486028 HAUS2Q9NVX0 235 aa12.6□□□□□ -0.39
HMG20B-211ENST00000486028 DMTF1Q9Y222 760 aa12.6□□□□□ -0.39
HMG20B-211ENST00000486028 FADS3Q9Y5Q0 445 aa12.6□□□□□ -0.39
HMG20B-211ENST00000486028 DMXL1Q9Y485 3027 aa12.6□□□□□ -0.39
HMG20B-211ENST00000486028 KNL1Q8NG31 2342 aa12.6□□□□□ -0.39
HMG20B-211ENST00000486028 LAMA1P25391 3075 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 A0A1W2PQU0 124 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 SLC30A4O14863 429 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 MATN3O15232 486 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 TSPAN6O43657 245 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 TIMP2P16035 220 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 XPAP23025 273 aaPredicted RBP12.59□□□□□ -0.39
HMG20B-211ENST00000486028 CCNCP24863 283 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 SERPINA4P29622 427 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 MAT2AP31153 395 aaKnown RBP12.59□□□□□ -0.39
HMG20B-211ENST00000486028 MMP13P45452 471 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 RGRP47804 291 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 ID4P47928 161 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 CSNK1EP49674 416 aaKnown RBP12.59□□□□□ -0.39
HMG20B-211ENST00000486028 SCNN1BP51168 640 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 SUOXP51687 545 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 AP1S1P61966 158 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 PPP2CBP62714 309 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 RPS21P63220 83 aaKnown RBP12.59□□□□□ -0.39
HMG20B-211ENST00000486028 RACK1P63244 317 aaKnown RBP12.59□□□□□ -0.39
HMG20B-211ENST00000486028 PPP2CAP67775 309 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 HNRNPDQ14103 355 aaKnown RBP12.59□□□□□ -0.39
HMG20B-211ENST00000486028 TFDP2Q14188 446 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 PUM1Q14671 1186 aaKnown RBP eCLIP12.59□□□□□ -0.392e-15■□□□□ 10.2
HMG20B-211ENST00000486028 SETMARQ53H47 684 aaPredicted RBP12.59□□□□□ -0.39
HMG20B-211ENST00000486028 SLC9A4Q6AI14 798 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 IL27RAQ6UWB1 636 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 MFSD7Q6UXD7 560 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 ADAT2Q7Z6V5 191 aaKnown RBP12.59□□□□□ -0.39
HMG20B-211ENST00000486028 HORMAD1Q86X24 394 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 PAF1Q8N7H5 531 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 PLD5Q8N7P1 536 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 CCNYQ8ND76 341 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 FATE1Q969F0 183 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 VOPP1Q96AW1 172 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 RMDN1Q96DB5 314 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 SERAC1Q96JX3 654 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 ORAI3Q9BRQ5 295 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 FSCN3Q9NQT6 498 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 AASDHPPTQ9NRN7 309 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 DTLQ9NZJ0 730 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 HEY1Q9Y5J3 304 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 TNRC6BQ9UPQ9 1833 aaKnown RBP12.59□□□□□ -0.39
HMG20B-211ENST00000486028 CACNA1EQ15878 2313 aa12.59□□□□□ -0.39
HMG20B-211ENST00000486028 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.58□□□□□ -0.4
HMG20B-211ENST00000486028 A0A1B0GVT2 93 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 MACROD2A1Z1Q3 448 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 C4orf47A7E2U8 309 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 PRAMEF26H0Y7S4 382 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 CDX4O14627 284 aaPredicted RBP12.58□□□□□ -0.4
HMG20B-211ENST00000486028 MUSKO15146 869 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 VILLO15195 856 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 ARHGAP6O43182 974 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 NRDCO43847 1150 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 NEBLO76041 1014 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 PIGNO95427 931 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 CDKN2BP42772 138 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 GRIA4P48058 902 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 C21orf59P57076 290 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 BCL2L1Q07817 233 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 SLC10A2Q12908 348 aaPredicted RBP12.58□□□□□ -0.4
HMG20B-211ENST00000486028 PDK1Q15118 436 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 TAZQ16635 292 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 ZNF284Q2VY69 593 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 SLC45A4Q5BKX6 768 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 TFDP3Q5H9I0 405 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 RALGPS1Q5JS13 557 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 KIAA1161Q6NSJ0 714 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 BRAT1Q6PJG6 821 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 SPOCD1Q6ZMY3 1216 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 BZW1Q7L1Q6 419 aaKnown RBP12.58□□□□□ -0.4
HMG20B-211ENST00000486028 CAMK1DQ8IU85 385 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 LRRC8AQ8IWT6 810 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 TEX26Q8N6G2 289 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 EXD1Q8NHP7 514 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 RBM41Q96IZ5 413 aaKnown RBP12.58□□□□□ -0.4
HMG20B-211ENST00000486028 SLC6A18Q96N87 628 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 NUDCD1Q96RS6 583 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 RTKNQ9BST9 563 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 TSGA10Q9BZW7 698 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 EBF2Q9HAK2 575 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 SCUBE2Q9NQ36 999 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 DLL3Q9NYJ7 618 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 NYNRINQ9P2P1 1898 aaKnown RBP12.58□□□□□ -0.4
HMG20B-211ENST00000486028 PCDHA3Q9Y5H8 950 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 ADGRG1Q9Y653 693 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 SLCO1B1Q9Y6L6 691 aa12.58□□□□□ -0.4
HMG20B-211ENST00000486028 CCDC66A2RUB6 948 aa12.57□□□□□ -0.4
HMG20B-211ENST00000486028 GRID2IPA4D2P6 1211 aa12.57□□□□□ -0.4
HMG20B-211ENST00000486028 AREL1O15033 823 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms