RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 BSNQ9UPA5 3926 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 COL27A1Q8IZC6 1860 aaPredicted RBP5.52□□□□□ -1.53
PTPN4-210ENST00000485247 A0A087X0B3 334 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 FAM92AA1XBS5 289 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 NEMP2A6NFY4 417 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 A8MXQ7 604 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 C10orf142B7Z368 130 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 SCAMP1O15126 338 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 LATO43561 262 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 RNASEH1O60930 286 aaKnown RBP5.52□□□□□ -1.53
PTPN4-210ENST00000485247 VPS4BO75351 444 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 TCEA3O75764 348 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 BEST1O76090 585 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 DLDP09622 509 aaKnown RBP5.52□□□□□ -1.53
PTPN4-210ENST00000485247 TMEM191BP0C7N4 346 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 SCP2P22307 547 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 CORO1AP31146 461 aaKnown RBP5.52□□□□□ -1.53
PTPN4-210ENST00000485247 SLC8A1P32418 973 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 UGT1A5P35504 534 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 GIPRP48546 466 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 PSMD8P48556 350 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 HARS2P49590 506 aaKnown RBP5.52□□□□□ -1.53
PTPN4-210ENST00000485247 PDX1P52945 283 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 ERVFRD-1P60508 538 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 GTF2BQ00403 316 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 GUCY1B3Q02153 619 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 OVGP1Q12889 678 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 DHX8Q14562 1220 aaKnown RBP5.52□□□□□ -1.53
PTPN4-210ENST00000485247 DRAP1Q14919 205 aaPredicted RBP5.52□□□□□ -1.53
PTPN4-210ENST00000485247 ZNF542PQ5EBM4 170 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 C10orf120Q5SQS8 335 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 C1QL3Q5VWW1 255 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 CAPRIN2Q6IMN6 1127 aaKnown RBP5.52□□□□□ -1.53
PTPN4-210ENST00000485247 GALNT18Q6P9A2 607 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 RAB11FIP2Q7L804 512 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 MAMDC2Q7Z304 686 aaPredicted RBP5.52□□□□□ -1.53
PTPN4-210ENST00000485247 DSG4Q86SJ6 1040 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 ADIPOR2Q86V24 386 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 IQCHQ86VS3 1027 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 DENND1CQ8IV53 801 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 BRSK2Q8IWQ3 736 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 ZC3H3Q8IXZ2 948 aaKnown RBP5.52□□□□□ -1.53
PTPN4-210ENST00000485247 AADATQ8N5Z0 425 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 C9orf43Q8TAL5 461 aaPredicted RBP5.52□□□□□ -1.53
PTPN4-210ENST00000485247 JPH3Q8WXH2 748 aaPredicted RBP5.52□□□□□ -1.53
PTPN4-210ENST00000485247 MYOCQ99972 504 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 SRRTQ9BXP5 876 aaKnown RBP5.52□□□□□ -1.53
PTPN4-210ENST00000485247 FBXO44Q9H4M3 255 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 PARVGQ9HBI0 331 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 USP29Q9HBJ7 922 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 EPB41L5Q9HCM4 733 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 PDE11AQ9HCR9 933 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 DMAP1Q9NPF5 467 aaPredicted RBP5.52□□□□□ -1.53
PTPN4-210ENST00000485247 PDRG1Q9NUG6 133 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 ABCB8Q9NUT2 735 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 KLHL11Q9NVR0 708 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 ARHGAP20Q9P2F6 1191 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 PISDQ9UG56 409 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 TUBD1Q9UJT1 453 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 ACSL6Q9UKU0 697 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 AGO1Q9UL18 857 aaKnown RBP5.52□□□□□ -1.53
PTPN4-210ENST00000485247 FZD4Q9ULV1 537 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 VPS4AQ9UN37 437 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 ZNF510Q9Y2H8 683 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 FHOD1Q9Y613 1164 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 MED13Q9UHV7 2174 aa5.52□□□□□ -1.53
PTPN4-210ENST00000485247 CENPEQ02224 2701 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 TDRD6O60522 2096 aaKnown RBP5.51□□□□□ -1.53
PTPN4-210ENST00000485247 SETD2Q9BYW2 2564 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-210ENST00000485247 PRAMEF33A0A0G2JMD5 474 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 A0A1W2PQH9 124 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 SLC12A8A0AV02 714 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 GOLGA8IPA6NC78 632 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 WIPF3A6NGB9 483 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 GOLGA8JA6NMD2 632 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 HRKO00198 91 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 MUSKO15146 869 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 NVLO15381 856 aaKnown RBP5.51□□□□□ -1.53
PTPN4-210ENST00000485247 PRAMEF10O60809 474 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 PFKFB2O60825 505 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 CDC45O75419 566 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 CLDN1O95832 211 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 PRKCGP05129 697 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 ATP5BP06576 529 aaKnown RBP5.51□□□□□ -1.53
PTPN4-210ENST00000485247 GSTM1P09488 218 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 JMJD7P0C870 316 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 PABPC1P11940 636 aaKnown RBP5.51□□□□□ -1.53
PTPN4-210ENST00000485247 GOT1P17174 413 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 PRKCAP17252 672 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 ENDOUP21128 410 aaKnown RBP5.51□□□□□ -1.53
PTPN4-210ENST00000485247 HOXD9P28356 352 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-210ENST00000485247 VIPR1P32241 457 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 ORC2Q13416 577 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-210ENST00000485247 GNL2Q13823 731 aaKnown RBP5.51□□□□□ -1.53
PTPN4-210ENST00000485247 SPIDRQ14159 915 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 POSTNQ15063 836 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 IL17AQ16552 155 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 MBLAC2Q68D91 279 aa5.51□□□□□ -1.53
PTPN4-210ENST00000485247 ZCCHC8Q6NZY4 707 aaKnown RBP5.51□□□□□ -1.53
PTPN4-210ENST00000485247 KLHDC10Q6PID8 442 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms