RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 PSKH2Q96QS6 385 aa7.92□□□□□ -1.14
MACF1-220ENST00000485063 GTPBP2Q9BX10 602 aaKnown RBP7.92□□□□□ -1.14
MACF1-220ENST00000485063 CPEB1Q9BZB8 566 aaKnown RBP7.92□□□□□ -1.14
MACF1-220ENST00000485063 ZDHHC5Q9C0B5 715 aa7.92□□□□□ -1.14
MACF1-220ENST00000485063 ATP13A3Q9H7F0 1226 aa7.92□□□□□ -1.14
MACF1-220ENST00000485063 TMEM9BQ9NQ34 198 aa7.92□□□□□ -1.14
MACF1-220ENST00000485063 ETNK2Q9NVF9 386 aa7.92□□□□□ -1.14
MACF1-220ENST00000485063 LHX3Q9UBR4 397 aa7.92□□□□□ -1.14
MACF1-220ENST00000485063 TFR2Q9UP52 801 aa7.92□□□□□ -1.14
MACF1-220ENST00000485063 DMTF1Q9Y222 760 aa7.92□□□□□ -1.14
MACF1-220ENST00000485063 HYOU1Q9Y4L1 999 aa7.92□□□□□ -1.14
MACF1-220ENST00000485063 HEY1Q9Y5J3 304 aa7.92□□□□□ -1.14
MACF1-220ENST00000485063 A0A1W2PQ67 120 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 LNP1A1A4G5 178 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 MACROD2A1Z1Q3 448 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 CCDC66A2RUB6 948 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 C16orf96A6NNT2 1141 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 PPP1R12AO14974 1030 aaPredicted RBP7.91□□□□□ -1.14
MACF1-220ENST00000485063 TSPAN6O43657 245 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 AP1G1O43747 822 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 RNGTTO60942 597 aaKnown RBP7.91□□□□□ -1.14
MACF1-220ENST00000485063 IGHV4-34P06331 123 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 PTMAP06454 111 aaKnown RBP7.91□□□□□ -1.14
MACF1-220ENST00000485063 ENGP17813 658 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 CD38P28907 300 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 MAT2AP31153 395 aaKnown RBP7.91□□□□□ -1.14
MACF1-220ENST00000485063 MMP13P45452 471 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 GRIA4P48058 902 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 METAP1P53582 386 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 LIMK1P53667 647 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 PRSS12P56730 875 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 C21orf59P57076 290 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 COPS2P61201 443 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 AP1S1P61966 158 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 RPS21P63220 83 aaKnown RBP7.91□□□□□ -1.14
MACF1-220ENST00000485063 RACK1P63244 317 aaKnown RBP7.91□□□□□ -1.14
MACF1-220ENST00000485063 SLC10A7Q0GE19 358 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 ELP6Q0PNE2 266 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 GALNT2Q10471 571 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 HNRNPDQ14103 355 aaKnown RBP7.91□□□□□ -1.14
MACF1-220ENST00000485063 PUM1Q14671 1186 aaKnown RBP eCLIP7.91□□□□□ -1.14
MACF1-220ENST00000485063 STAT4Q14765 748 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 RSPO4Q2I0M5 234 aaPredicted RBP7.91□□□□□ -1.14
MACF1-220ENST00000485063 TFDP3Q5H9I0 405 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 RALGPS1Q5JS13 557 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 CCDC181Q5TID7 509 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 KAZNQ674X7 775 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 KIAA1161Q6NSJ0 714 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 ERAP2Q6P179 960 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 BRAT1Q6PJG6 821 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 ARHGAP36Q6ZRI8 547 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 PARS2Q7L3T8 475 aaKnown RBP7.91□□□□□ -1.14
MACF1-220ENST00000485063 PEX26Q7Z412 305 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 TRIM69Q86WT6 500 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 LRRC8AQ8IWT6 810 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 KATNAL2Q8IYT4 538 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 UBL4BQ8N7F7 174 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 TSEN2Q8NCE0 465 aaKnown RBP7.91□□□□□ -1.14
MACF1-220ENST00000485063 EXD1Q8NHP7 514 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 HDAC11Q96DB2 347 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 SERAC1Q96JX3 654 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 FERMT1Q9BQL6 677 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 RTKNQ9BST9 563 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 DESI2Q9BSY9 194 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 POLR1EQ9GZS1 481 aaKnown RBP7.91□□□□□ -1.14
MACF1-220ENST00000485063 BRD8Q9H0E9 1235 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 SUV39H2Q9H5I1 410 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 TM9SF3Q9HD45 589 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 AASDHPPTQ9NRN7 309 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 DKK3Q9UBP4 350 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 AMACRQ9UHK6 382 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 AMFRQ9UKV5 643 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 TP53BP1Q12888 1972 aaPredicted RBP7.91□□□□□ -1.14
MACF1-220ENST00000485063 PI4KAP42356 2102 aa7.91□□□□□ -1.14
MACF1-220ENST00000485063 NUMA1Q14980 2115 aa7.9□□□□□ -1.14
MACF1-220ENST00000485063 A0A1W2PQU0 124 aa7.9□□□□□ -1.14
MACF1-220ENST00000485063 RCCD1A6NED2 376 aa7.9□□□□□ -1.14
MACF1-220ENST00000485063 MIF4GDA9UHW6 222 aaKnown RBP7.9□□□□□ -1.14
MACF1-220ENST00000485063 PRAMEF26H0Y7S4 382 aa7.9□□□□□ -1.14
MACF1-220ENST00000485063 SLC30A4O14863 429 aa7.9□□□□□ -1.14
MACF1-220ENST00000485063 MATN3O15232 486 aa7.9□□□□□ -1.14
MACF1-220ENST00000485063 LATO43561 262 aa7.9□□□□□ -1.14
MACF1-220ENST00000485063 GDF9O60383 454 aa7.9□□□□□ -1.14
MACF1-220ENST00000485063 DFNA5O60443 496 aa7.9□□□□□ -1.14
MACF1-220ENST00000485063 OPHN1O60890 802 aa7.9□□□□□ -1.14
MACF1-220ENST00000485063 MAP3K6O95382 1288 aa7.9□□□□□ -1.14
MACF1-220ENST00000485063 PIGNO95427 931 aa7.9□□□□□ -1.14
MACF1-220ENST00000485063 CER1O95813 267 aa7.9□□□□□ -1.14
MACF1-220ENST00000485063 CCDC175P0C221 793 aa7.9□□□□□ -1.14
MACF1-220ENST00000485063 KRT10P13645 584 aa7.9□□□□□ -1.14
MACF1-220ENST00000485063 CCNB1P14635 433 aa7.9□□□□□ -1.14
MACF1-220ENST00000485063 TGM2P21980 687 aa7.9□□□□□ -1.14
MACF1-220ENST00000485063 HNRNPA2B1P22626 353 aaKnown RBP7.9□□□□□ -1.14
MACF1-220ENST00000485063 CA4P22748 312 aa7.9□□□□□ -1.14
MACF1-220ENST00000485063 CES1P23141 567 aa7.9□□□□□ -1.14
MACF1-220ENST00000485063 AKT2P31751 481 aa7.9□□□□□ -1.14
MACF1-220ENST00000485063 CTNNA1P35221 906 aaKnown RBP7.9□□□□□ -1.14
MACF1-220ENST00000485063 CDKN2BP42772 138 aa7.9□□□□□ -1.14
MACF1-220ENST00000485063 NR2C2P49116 596 aa7.9□□□□□ -1.14
MACF1-220ENST00000485063 CSNK1EP49674 416 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms