RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 GRM3Q14832 879 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 CYTH1Q15438 398 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 STX1AQ16623 288 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 TPRG1LQ5T0D9 272 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 IGF2-ASQ6U949 168 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 KDM7AQ6ZMT4 941 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 TTC7BQ86TV6 843 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 MCOLN2Q8IZK6 566 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 CXorf40AQ8TE69 158 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 HMCESQ96FZ2 354 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 EIF3CQ99613 913 aaKnown RBP11.6□□□□□ -0.55
SCFD1-206ENST00000484733 KLC2Q9H0B6 622 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 LHX3Q9UBR4 397 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 ITM2BQ9Y287 266 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 TMEM110-MUSTN1A8MSY1 372 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 TK2O00142 265 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 TM7SF2O76062 418 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 IGFALSP35858 605 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 RHOAP61586 193 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 NCAPHQ15003 741 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 SCYL2Q6P3W7 929 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 LEKR1Q6ZMV7 388 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 TP53I13Q8NBR0 393 aaPredicted RBP11.6□□□□□ -0.55
SCFD1-206ENST00000484733 LSM14AQ8ND56 463 aaKnown RBP11.6□□□□□ -0.55
SCFD1-206ENST00000484733 IFI44Q8TCB0 444 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 BBC3Q96PG8 261 aaPredicted RBP11.6□□□□□ -0.55
SCFD1-206ENST00000484733 SYT11Q9BT88 431 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 BOCQ9BWV1 1114 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 CAAP1Q9H8G2 361 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 COL27A1Q8IZC6 1860 aaPredicted RBP11.6□□□□□ -0.55
SCFD1-206ENST00000484733 DSPP15924 2871 aaKnown RBP11.6□□□□□ -0.55
SCFD1-206ENST00000484733 EME2A4GXA9 379 aaPredicted RBP11.59□□□□□ -0.55
SCFD1-206ENST00000484733 DESP17661 470 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 LSSP48449 732 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 CSNK1DP48730 415 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 PEX5P50542 639 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 NDST2P52849 883 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 RPL7AP62424 266 aaKnown RBP11.59□□□□□ -0.55
SCFD1-206ENST00000484733 ELP6Q0PNE2 266 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 AGERQ15109 404 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 NR0B2Q15466 257 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 MACC1Q6ZN28 852 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 IRF2BP2Q7Z5L9 587 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 DNAAF5Q86Y56 855 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 LMX1AQ8TE12 382 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 GLMNQ92990 594 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 CRELD1Q96HD1 420 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 MCEEQ96PE7 176 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 GBP4Q96PP9 640 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 HSD3B7Q9H2F3 369 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 LRRC19Q9H756 370 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 PDFQ9HBH1 243 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 PCDHB1Q9Y5F3 818 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 FREM2Q5SZK8 3169 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 CFAP69A5D8W1 941 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 MMP20O60882 483 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 NEBLO76041 1014 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 CDK11BP21127 795 aaKnown RBP11.59□□□□□ -0.55
SCFD1-206ENST00000484733 RPIAP49247 311 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 ERVPABLB-1P60509 514 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 ZNF354CQ86Y25 554 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 PHACTR4Q8IZ21 702 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 WDR48Q8TAF3 677 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 MAPK15Q8TD08 544 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 ZNF641Q96N77 438 aaPredicted RBP11.59□□□□□ -0.55
SCFD1-206ENST00000484733 SEPT11Q9NVA2 429 aaKnown RBP11.59□□□□□ -0.55
SCFD1-206ENST00000484733 UBA2Q9UBT2 640 aaPredicted RBP11.59□□□□□ -0.55
SCFD1-206ENST00000484733 ITPR1Q14643 2758 aa11.59□□□□□ -0.55
SCFD1-206ENST00000484733 LMO7DNF2Z398 122 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 CREB3O43889 395 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 PRAMEF11O60813 436 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 CSO75390 466 aaKnown RBP11.58□□□□□ -0.56
SCFD1-206ENST00000484733 MYF5P13349 255 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 THOP1P52888 689 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 OGDHQ02218 1023 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 PLEKHA7Q6IQ23 1121 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 DCUN1D2Q6PH85 259 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 SDR16C5Q8N3Y7 309 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 HIC2Q96JB3 615 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 TUBGCP5Q96RT8 1024 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 IL12RB2Q99665 862 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 ABCG4Q9H172 646 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 SUV39H2Q9H5I1 410 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 POLR1BQ9H9Y6 1135 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 MBNL1Q9NR56 388 aaKnown RBP11.58□□□□□ -0.56
SCFD1-206ENST00000484733 RAI2Q9Y5P3 530 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 ZFYVE26Q68DK2 2539 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 INSIG1O15503 277 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 TNFAIP3P21580 790 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 ISXQ2M1V0 245 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 DEFB133Q30KQ1 61 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 C6orf132Q5T0Z8 1188 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 AFMIDQ63HM1 303 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 LVRNQ6Q4G3 990 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 EFL1Q7Z2Z2 1120 aaKnown RBP11.58□□□□□ -0.56
SCFD1-206ENST00000484733 VPS36Q86VN1 386 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 FSTL5Q8N475 847 aaPredicted RBP11.58□□□□□ -0.56
SCFD1-206ENST00000484733 ZNF248Q8NDW4 579 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 PARVAQ9NVD7 372 aa11.58□□□□□ -0.56
SCFD1-206ENST00000484733 APOBEC3BQ9UH17 382 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms