RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 DOCK6Q96HP0 2047 aa26.5■■□□□ 1.83
SHOX2-204ENST00000483851 CCT8L1PA6NM43 557 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 NDST3O95803 873 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 CD160O95971 181 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 DUSP6Q16828 381 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 HSP90AA5PQ58FG0 334 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 GRASPQ7Z6J2 395 aaPredicted RBP26.49■■□□□ 1.83
SHOX2-204ENST00000483851 SLC25A41Q8N5S1 370 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 TLE6Q9H808 572 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 ACTR5Q9H9F9 607 aaPredicted RBP26.49■■□□□ 1.83
SHOX2-204ENST00000483851 MLXIPLQ9NP71 852 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 SCUBE2Q9NQ36 999 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 VPS51Q9UID3 782 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 CCL26Q9Y258 94 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 SIN3BO75182 1162 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 TMCC1O94876 653 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 PYGBP11216 843 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 SLC20A2Q08357 652 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 KDELC2Q7Z4H8 507 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 ANKS4BQ8N8V4 417 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 ZNF778Q96MU6 729 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 TRIB3Q96RU7 358 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 CDCA3Q99618 268 aaPredicted RBP26.49■■□□□ 1.83
SHOX2-204ENST00000483851 RBBP8Q99708 897 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 SMG9Q9H0W8 520 aaKnown RBP26.49■■□□□ 1.83
SHOX2-204ENST00000483851 NOD2Q9HC29 1040 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 MSRAQ9UJ68 235 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 RIMKLBQ9ULI2 386 aa26.49■■□□□ 1.83
SHOX2-204ENST00000483851 ITGA2BP08514 1039 aa26.48■■□□□ 1.83
SHOX2-204ENST00000483851 HADHAP40939 763 aa26.48■■□□□ 1.83
SHOX2-204ENST00000483851 USP4Q13107 963 aa26.48■■□□□ 1.83
SHOX2-204ENST00000483851 ZNF77Q15935 545 aa26.48■■□□□ 1.83
SHOX2-204ENST00000483851 SEPT7Q16181 437 aaKnown RBP26.48■■□□□ 1.83
SHOX2-204ENST00000483851 UGP2Q16851 508 aa26.48■■□□□ 1.83
SHOX2-204ENST00000483851 MROH9Q5TGP6 573 aa26.48■■□□□ 1.83
SHOX2-204ENST00000483851 WFDC5Q8TCV5 224 aa26.48■■□□□ 1.83
SHOX2-204ENST00000483851 FGFR1OP2Q9NVK5 253 aa26.48■■□□□ 1.83
SHOX2-204ENST00000483851 PSAT1Q9Y617 370 aa26.48■■□□□ 1.83
SHOX2-204ENST00000483851 MROH6A6NGR9 719 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 TIMM44O43615 452 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 SNAP91O60641 907 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 ARCN1P48444 511 aaKnown RBP26.47■■□□□ 1.83
SHOX2-204ENST00000483851 SCNN1BP51168 640 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 NEK3P51956 506 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 TSTD2Q5T7W7 516 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 PACS2Q86VP3 889 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 TTC16Q8NEE8 873 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 GDAP1Q8TB36 358 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 TCP10LQ8TDR4 215 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 ISL2Q96A47 359 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 PBX4Q9BYU1 374 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 MRPS23Q9Y3D9 190 aaKnown RBP26.47■■□□□ 1.83
SHOX2-204ENST00000483851 ACTL7AQ9Y615 435 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 COPEO14579 308 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 PENKP01210 267 aaPredicted RBP26.47■■□□□ 1.83
SHOX2-204ENST00000483851 TAC1P20366 129 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 FOXN2P32314 431 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 LIMK2P53671 638 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 BMPR2Q13873 1038 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 HHATQ5VTY9 493 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 ESRP1Q6NXG1 681 aaKnown RBP26.47■■□□□ 1.83
SHOX2-204ENST00000483851 RGS9BPQ6ZS82 235 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 TPGS1Q6ZTW0 290 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 STRA8Q7Z7C7 330 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 ADGRD2Q7Z7M1 963 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 RBM23Q86U06 439 aaKnown RBP26.47■■□□□ 1.83
SHOX2-204ENST00000483851 TAX1BP1Q86VP1 789 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 MCMBPQ9BTE3 642 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 PIDD1Q9HB75 910 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 CAPN7Q9Y6W3 813 aa26.47■■□□□ 1.83
SHOX2-204ENST00000483851 MYLKQ15746 1914 aa26.46■■□□□ 1.83
SHOX2-204ENST00000483851 MYO7AQ13402 2215 aa26.46■■□□□ 1.83
SHOX2-204ENST00000483851 TTC24A2A3L6 582 aaPredicted RBP26.46■■□□□ 1.83
SHOX2-204ENST00000483851 GOLGA8RI6L899 631 aa26.46■■□□□ 1.83
SHOX2-204ENST00000483851 SLC9A3R1O14745 358 aaPredicted RBP26.46■■□□□ 1.83
SHOX2-204ENST00000483851 RGRP47804 291 aa26.46■■□□□ 1.83
SHOX2-204ENST00000483851 CALML6Q8TD86 181 aa26.46■■□□□ 1.83
SHOX2-204ENST00000483851 SMG7Q92540 1137 aaKnown RBP26.46■■□□□ 1.83
SHOX2-204ENST00000483851 KLF6Q99612 283 aaPredicted RBP26.46■■□□□ 1.83
SHOX2-204ENST00000483851 FAM167BQ9BTA0 163 aa26.46■■□□□ 1.83
SHOX2-204ENST00000483851 LHX3Q9UBR4 397 aa26.46■■□□□ 1.83
SHOX2-204ENST00000483851 PBX2P40425 430 aa26.45■■□□□ 1.83
SHOX2-204ENST00000483851 NTHL1P78549 312 aa26.45■■□□□ 1.83
SHOX2-204ENST00000483851 ILF2Q12905 390 aaKnown RBP26.45■■□□□ 1.83
SHOX2-204ENST00000483851 LMAN2Q12907 356 aa26.45■■□□□ 1.83
SHOX2-204ENST00000483851 SEPT6Q14141 434 aa26.45■■□□□ 1.83
SHOX2-204ENST00000483851 PLEKHG6Q3KR16 790 aa26.45■■□□□ 1.83
SHOX2-204ENST00000483851 LMNTD2Q8IXW0 634 aa26.45■■□□□ 1.83
SHOX2-204ENST00000483851 BRSK1Q8TDC3 778 aa26.45■■□□□ 1.83
SHOX2-204ENST00000483851 TDRD1Q9BXT4 1180 aaKnown RBP26.45■■□□□ 1.83
SHOX2-204ENST00000483851 IQCGQ9H095 443 aaKnown RBP26.45■■□□□ 1.83
SHOX2-204ENST00000483851 SFXN1Q9H9B4 322 aa26.45■■□□□ 1.83
SHOX2-204ENST00000483851 IARS2Q9NSE4 1012 aaKnown RBP26.45■■□□□ 1.83
SHOX2-204ENST00000483851 VAPBO95292 243 aa26.45■■□□□ 1.82
SHOX2-204ENST00000483851 CSNK1DP48730 415 aa26.45■■□□□ 1.82
SHOX2-204ENST00000483851 POLD2P49005 469 aa26.45■■□□□ 1.82
SHOX2-204ENST00000483851 KCNC3Q14003 757 aa26.45■■□□□ 1.82
SHOX2-204ENST00000483851 CNGA3Q16281 694 aa26.45■■□□□ 1.82
SHOX2-204ENST00000483851 ZNF697Q5TEC3 545 aa26.45■■□□□ 1.82
SHOX2-204ENST00000483851 LVRNQ6Q4G3 990 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms