RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 IGLON5A6NGN9 336 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 A6NNZ2 444 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 AREL1O15033 823 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 PAK4O96013 591 aaPredicted RBP14.04□□□□□ -0.16
VARS-225ENST00000482996 TIMP2P16035 220 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 EPHA8P29322 1005 aaPredicted RBP14.04□□□□□ -0.16
VARS-225ENST00000482996 SERPINA4P29622 427 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 GJC1P36383 396 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 RENBPP51606 427 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 ELP6Q0PNE2 266 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 TMCO4Q5TGY1 634 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 ARHGAP36Q6ZRI8 547 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 PTAR1Q7Z6K3 402 aaPredicted RBP14.04□□□□□ -0.16
VARS-225ENST00000482996 ABI3BPQ7Z7G0 1075 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 SRLQ86TD4 932 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 GATAD2AQ86YP4 633 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 DCP2Q8IU60 420 aaKnown RBP14.04□□□□□ -0.16
VARS-225ENST00000482996 ATPAF2Q8N5M1 289 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 PAF1Q8N7H5 531 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 TSEN2Q8NCE0 465 aaKnown RBP14.04□□□□□ -0.16
VARS-225ENST00000482996 CXorf40AQ8TE69 158 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 SAP25Q8TEE9 199 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 NSMCE1Q8WV22 266 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 ASB12Q8WXK4 309 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 ZNF641Q96N77 438 aaPredicted RBP14.04□□□□□ -0.16
VARS-225ENST00000482996 LENG8Q96PV6 779 aaPredicted RBP14.04□□□□□ -0.16
VARS-225ENST00000482996 TUBGCP5Q96RT8 1024 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 CHP1Q99653 195 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 C1QTNF7Q9BXJ2 289 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 C1QTNF2Q9BXJ5 285 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 CALN1Q9BXU9 219 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 ATP13A3Q9H7F0 1226 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 ETNK2Q9NVF9 386 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 FTSJ1Q9UET6 329 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 ITM2BQ9Y287 266 aa14.04□□□□□ -0.16
VARS-225ENST00000482996 FPGTO14772 594 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 TNFSF14O43557 240 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 HYAL3O43820 417 aaPredicted RBP14.03□□□□□ -0.16
VARS-225ENST00000482996 PIGNO95427 931 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 KRT7P08729 469 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 MAN1A1P33908 653 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 CLDN2P57739 230 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 NSUN2Q08J23 767 aaKnown RBP eCLIP14.03□□□□□ -0.16
VARS-225ENST00000482996 FGL2Q14314 439 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 ZNF235Q14590 738 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 LBRQ14739 615 aaKnown RBP14.03□□□□□ -0.16
VARS-225ENST00000482996 SHBQ15464 509 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 LRRC73Q5JTD7 316 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 ZFYVE27Q5T4F4 411 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 ERAP2Q6P179 960 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 BRAT1Q6PJG6 821 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 KYAT3Q6YP21 454 aaKnown RBP14.03□□□□□ -0.16
VARS-225ENST00000482996 GCNT7Q6ZNI0 430 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 MAP7D3Q8IWC1 876 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 BBS5Q8N3I7 341 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 KCTD6Q8NC69 237 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 DENND6BQ8NEG7 585 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 OR13H1Q8NG92 308 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 TSC1Q92574 1164 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 VOPP1Q96AW1 172 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 SCNM1Q9BWG6 230 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 SPTLC3Q9NUV7 552 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 KLHL11Q9NVR0 708 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 GGT7Q9UJ14 662 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 WASF3Q9UPY6 502 aa14.03□□□□□ -0.16
VARS-225ENST00000482996 MAP1BP46821 2468 aaKnown RBP14.03□□□□□ -0.16
VARS-225ENST00000482996 TSPAN11A1L157 253 aa14.02□□□□□ -0.17
VARS-225ENST00000482996 TMEM110-MUSTN1A8MSY1 372 aa14.02□□□□□ -0.17
VARS-225ENST00000482996 SPINT1O43278 529 aa14.02□□□□□ -0.17
VARS-225ENST00000482996 TOP3BO95985 862 aaKnown RBP14.02□□□□□ -0.17
VARS-225ENST00000482996 SPINK2P20155 84 aa14.02□□□□□ -0.17
VARS-225ENST00000482996 HSPA9P38646 679 aaKnown RBP14.02□□□□□ -0.17
VARS-225ENST00000482996 RABIFP47224 123 aa14.02□□□□□ -0.17
VARS-225ENST00000482996 AP1S1P61966 158 aa14.02□□□□□ -0.17
VARS-225ENST00000482996 BCL2L1Q07817 233 aa14.02□□□□□ -0.17
VARS-225ENST00000482996 BNIP3Q12983 259 aa14.02□□□□□ -0.17
VARS-225ENST00000482996 TBX2Q13207 712 aaPredicted RBP14.02□□□□□ -0.17
VARS-225ENST00000482996 MESDQ14696 234 aa14.02□□□□□ -0.17
VARS-225ENST00000482996 PDK2Q15119 407 aa14.02□□□□□ -0.17
VARS-225ENST00000482996 UGP2Q16851 508 aa14.02□□□□□ -0.17
VARS-225ENST00000482996 Q6ZSR6 202 aa14.02□□□□□ -0.17
VARS-225ENST00000482996 RAB44Q7Z6P3 723 aaPredicted RBP14.02□□□□□ -0.17
VARS-225ENST00000482996 CAMK1DQ8IU85 385 aa14.02□□□□□ -0.17
VARS-225ENST00000482996 LRRC49Q8IUZ0 686 aa14.02□□□□□ -0.17
VARS-225ENST00000482996 TP53INP2Q8IXH6 220 aa14.02□□□□□ -0.17
VARS-225ENST00000482996 RHOT2Q8IXI1 618 aa14.02□□□□□ -0.17
VARS-225ENST00000482996 CHCHD4Q8N4Q1 142 aa14.02□□□□□ -0.17
VARS-225ENST00000482996 FAM71BQ8TC56 605 aa14.02□□□□□ -0.17
VARS-225ENST00000482996 ADAMTS14Q8WXS8 1223 aa14.02□□□□□ -0.17
VARS-225ENST00000482996 PSKH2Q96QS6 385 aa14.02□□□□□ -0.17
VARS-225ENST00000482996 ZNF670Q9BS34 389 aa14.02□□□□□ -0.17
VARS-225ENST00000482996 NEUROG3Q9Y4Z2 214 aa14.02□□□□□ -0.17
VARS-225ENST00000482996 TP53BP1Q12888 1972 aaPredicted RBP14.02□□□□□ -0.17
VARS-225ENST00000482996 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.01□□□□□ -0.17
VARS-225ENST00000482996 POM121BA6NF01 834 aa14.01□□□□□ -0.17
VARS-225ENST00000482996 GOLGA8CPA6NN73 597 aa14.01□□□□□ -0.17
VARS-225ENST00000482996 RAD51BO15315 384 aa14.01□□□□□ -0.17
VARS-225ENST00000482996 BUB1BO60566 1050 aaPredicted RBP14.01□□□□□ -0.17
VARS-225ENST00000482996 MMP20O60882 483 aa14.01□□□□□ -0.17
VARS-225ENST00000482996 TM7SF2O76062 418 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms