RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 RFTN1Q14699 578 aaPredicted RBP20.13■□□□□ 0.81
MSH5-215ENST00000482280 CYTH1Q15438 398 aa20.13■□□□□ 0.81
MSH5-215ENST00000482280 HADHQ16836 314 aaKnown RBP20.13■□□□□ 0.81
MSH5-215ENST00000482280 SMTNL2Q2TAL5 461 aa20.13■□□□□ 0.81
MSH5-215ENST00000482280 CCNI2Q6ZMN8 369 aaPredicted RBP20.13■□□□□ 0.81
MSH5-215ENST00000482280 TMPRSS7Q7RTY8 843 aa20.13■□□□□ 0.81
MSH5-215ENST00000482280 BBS5Q8N3I7 341 aa20.13■□□□□ 0.81
MSH5-215ENST00000482280 ARFGAP1Q8N6T3 406 aa20.13■□□□□ 0.81
MSH5-215ENST00000482280 HCAR2Q8TDS4 363 aa20.13■□□□□ 0.81
MSH5-215ENST00000482280 ASB12Q8WXK4 309 aa20.13■□□□□ 0.81
MSH5-215ENST00000482280 ZNF641Q96N77 438 aaPredicted RBP20.13■□□□□ 0.81
MSH5-215ENST00000482280 LENG8Q96PV6 779 aaPredicted RBP20.13■□□□□ 0.81
MSH5-215ENST00000482280 TUBGCP5Q96RT8 1024 aa20.13■□□□□ 0.81
MSH5-215ENST00000482280 C1QTNF2Q9BXJ5 285 aa20.13■□□□□ 0.81
MSH5-215ENST00000482280 XPO4Q9C0E2 1151 aaKnown RBP20.13■□□□□ 0.81
MSH5-215ENST00000482280 TOR4AQ9NXH8 423 aa20.13■□□□□ 0.81
MSH5-215ENST00000482280 LHX3Q9UBR4 397 aa20.13■□□□□ 0.81
MSH5-215ENST00000482280 A0A087X0T9 212 aa20.12■□□□□ 0.81
MSH5-215ENST00000482280 GYPCP04921 128 aa20.12■□□□□ 0.81
MSH5-215ENST00000482280 FAM228BP0C875 321 aa20.12■□□□□ 0.81
MSH5-215ENST00000482280 SERPINB6P35237 376 aa20.12■□□□□ 0.81
MSH5-215ENST00000482280 IL10RBQ08334 325 aa20.12■□□□□ 0.81
MSH5-215ENST00000482280 LRRC73Q5JTD7 316 aa20.12■□□□□ 0.81
MSH5-215ENST00000482280 BRAT1Q6PJG6 821 aa20.12■□□□□ 0.81
MSH5-215ENST00000482280 DHRS13Q6UX07 377 aa20.12■□□□□ 0.81
MSH5-215ENST00000482280 PARGQ86W56 976 aa20.12■□□□□ 0.81
MSH5-215ENST00000482280 TSPY26PQ9H489 355 aa20.12■□□□□ 0.81
MSH5-215ENST00000482280 SUV39H2Q9H5I1 410 aa20.12■□□□□ 0.81
MSH5-215ENST00000482280 PDFQ9HBH1 243 aa20.12■□□□□ 0.81
MSH5-215ENST00000482280 CWC15Q9P013 229 aaKnown RBP20.12■□□□□ 0.81
MSH5-215ENST00000482280 TPRP12270 2363 aaKnown RBP20.12■□□□□ 0.81
MSH5-215ENST00000482280 FFAR2O15552 330 aa20.11■□□□□ 0.81
MSH5-215ENST00000482280 PIGNO95427 931 aa20.11■□□□□ 0.81
MSH5-215ENST00000482280 CKMT2P17540 419 aa20.11■□□□□ 0.81
MSH5-215ENST00000482280 DGKAP23743 735 aa20.11■□□□□ 0.81
MSH5-215ENST00000482280 BCL2L1Q07817 233 aa20.11■□□□□ 0.81
MSH5-215ENST00000482280 DNAJC3Q13217 504 aa20.11■□□□□ 0.81
MSH5-215ENST00000482280 ILKQ13418 452 aa20.11■□□□□ 0.81
MSH5-215ENST00000482280 PDE1CQ14123 709 aaPredicted RBP20.11■□□□□ 0.81
MSH5-215ENST00000482280 ZNF235Q14590 738 aa20.11■□□□□ 0.81
MSH5-215ENST00000482280 DPYSL2Q16555 572 aa20.11■□□□□ 0.81
MSH5-215ENST00000482280 SPECC1LQ69YQ0 1117 aa20.11■□□□□ 0.81
MSH5-215ENST00000482280 SRLQ86TD4 932 aa20.11■□□□□ 0.81
MSH5-215ENST00000482280 TEKT4Q8WW24 435 aa20.11■□□□□ 0.81
MSH5-215ENST00000482280 CTNNBL1Q8WYA6 563 aaPredicted RBP20.11■□□□□ 0.81
MSH5-215ENST00000482280 ANP32EQ9BTT0 268 aa20.11■□□□□ 0.81
MSH5-215ENST00000482280 WRAP53Q9BUR4 548 aaKnown RBP20.11■□□□□ 0.81
MSH5-215ENST00000482280 CCDC86Q9H6F5 360 aaKnown RBP20.11■□□□□ 0.81
MSH5-215ENST00000482280 CTTNBP2NLQ9P2B4 639 aa20.11■□□□□ 0.81
MSH5-215ENST00000482280 SEPT3Q9UH03 358 aa20.11■□□□□ 0.81
MSH5-215ENST00000482280 LCMT1Q9UIC8 334 aa20.11■□□□□ 0.81
MSH5-215ENST00000482280 GGT7Q9UJ14 662 aa20.11■□□□□ 0.81
MSH5-215ENST00000482280 POM121BA6NF01 834 aa20.1■□□□□ 0.81
MSH5-215ENST00000482280 AREL1O15033 823 aa20.1■□□□□ 0.81
MSH5-215ENST00000482280 MMP20O60882 483 aa20.1■□□□□ 0.81
MSH5-215ENST00000482280 DKK1O94907 266 aa20.1■□□□□ 0.81
MSH5-215ENST00000482280 CYP1A2P05177 515 aa20.1■□□□□ 0.81
MSH5-215ENST00000482280 JUPP14923 745 aa20.1■□□□□ 0.81
MSH5-215ENST00000482280 CSNK1DP48730 415 aa20.1■□□□□ 0.81
MSH5-215ENST00000482280 POLR2LP62875 67 aaKnown RBP20.1■□□□□ 0.81
MSH5-215ENST00000482280 ZNF211Q13398 564 aaPredicted RBP20.1■□□□□ 0.81
MSH5-215ENST00000482280 FGL2Q14314 439 aa20.1■□□□□ 0.81
MSH5-215ENST00000482280 UGP2Q16851 508 aa20.1■□□□□ 0.81
MSH5-215ENST00000482280 ZFYVE27Q5T4F4 411 aa20.1■□□□□ 0.81
MSH5-215ENST00000482280 TMCO4Q5TGY1 634 aa20.1■□□□□ 0.81
MSH5-215ENST00000482280 TMPRSS12Q86WS5 348 aa20.1■□□□□ 0.81
MSH5-215ENST00000482280 NIPA2Q8N8Q9 360 aa20.1■□□□□ 0.81
MSH5-215ENST00000482280 BMFQ96LC9 184 aa20.1■□□□□ 0.81
MSH5-215ENST00000482280 ZNF599Q96NL3 588 aa20.1■□□□□ 0.81
MSH5-215ENST00000482280 DUSP23Q9BVJ7 150 aa20.1■□□□□ 0.81
MSH5-215ENST00000482280 TMEM121BQ9BXQ6 578 aaPredicted RBP20.1■□□□□ 0.81
MSH5-215ENST00000482280 SPTY2D1-AS1A0A0U1RR47 76 aa20.09■□□□□ 0.81
MSH5-215ENST00000482280 TOR1BO14657 336 aa20.09■□□□□ 0.81
MSH5-215ENST00000482280 RAD51BO15315 384 aa20.09■□□□□ 0.81
MSH5-215ENST00000482280 INSIG1O15503 277 aa20.09■□□□□ 0.81
MSH5-215ENST00000482280 PIAS2O75928 621 aa20.09■□□□□ 0.81
MSH5-215ENST00000482280 KRT37O76014 449 aa20.09■□□□□ 0.81
MSH5-215ENST00000482280 RARAP10276 462 aa20.09■□□□□ 0.81
MSH5-215ENST00000482280 TIMP2P16035 220 aa20.09■□□□□ 0.81
MSH5-215ENST00000482280 NFKBIAP25963 317 aa20.09■□□□□ 0.81
MSH5-215ENST00000482280 DPYSQ14117 519 aa20.09■□□□□ 0.81
MSH5-215ENST00000482280 AFMIDQ63HM1 303 aa20.09■□□□□ 0.81
MSH5-215ENST00000482280 CYP4V2Q6ZWL3 525 aaPredicted RBP20.09■□□□□ 0.81
MSH5-215ENST00000482280 SLC22A18ASQ8N1D0 253 aa20.09■□□□□ 0.81
MSH5-215ENST00000482280 ATPAF2Q8N5M1 289 aa20.09■□□□□ 0.81
MSH5-215ENST00000482280 NPWQ8N729 165 aa20.09■□□□□ 0.81
MSH5-215ENST00000482280 TSEN2Q8NCE0 465 aaKnown RBP20.09■□□□□ 0.81
MSH5-215ENST00000482280 OR8K1Q8NGG5 319 aa20.09■□□□□ 0.81
MSH5-215ENST00000482280 ZNF564Q8TBZ8 553 aaPredicted RBP20.09■□□□□ 0.81
MSH5-215ENST00000482280 BTN2A2Q8WVV5 523 aa20.09■□□□□ 0.81
MSH5-215ENST00000482280 HAUS2Q9NVX0 235 aa20.09■□□□□ 0.81
MSH5-215ENST00000482280 SIGLEC6O43699 453 aa20.08■□□□□ 0.81
MSH5-215ENST00000482280 AKR1B10O60218 316 aa20.08■□□□□ 0.81
MSH5-215ENST00000482280 LZTS3O60299 673 aaPredicted RBP20.08■□□□□ 0.81
MSH5-215ENST00000482280 H2AFZP0C0S5 128 aa20.08■□□□□ 0.81
MSH5-215ENST00000482280 IL1R2P27930 398 aa20.08■□□□□ 0.81
MSH5-215ENST00000482280 GJC1P36383 396 aa20.08■□□□□ 0.81
MSH5-215ENST00000482280 HSPA9P38646 679 aaKnown RBP20.08■□□□□ 0.81
MSH5-215ENST00000482280 EIF4A3P38919 411 aaKnown RBP20.08■□□□□ 0.81
MSH5-215ENST00000482280 ACADVLP49748 655 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms