RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 A0A0U1RQF3 1178 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 PRSS47A8MTI9 375 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 LIASO43766 372 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 KLK8O60259 260 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 SEC14L2O76054 403 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 HSPA1AP0DMV8 641 aaKnown RBP5.97□□□□□ -1.45
SF3B1-210ENST00000482158 HSPA1BP0DMV9 641 aaKnown RBP5.97□□□□□ -1.45
SF3B1-210ENST00000482158 LAMP2P13473 410 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 ENO3P13929 434 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-210ENST00000482158 ZNF8P17098 575 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-210ENST00000482158 PSMA4P25789 261 aaKnown RBP5.97□□□□□ -1.45
SF3B1-210ENST00000482158 BSGP35613 385 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 ME1P48163 572 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 ALDH7A1P49419 539 aaKnown RBP5.97□□□□□ -1.45
SF3B1-210ENST00000482158 RASSF2P50749 326 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 CLCN5P51795 746 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 HDAC4P56524 1084 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 MRPS21P82921 87 aaKnown RBP5.97□□□□□ -1.45
SF3B1-210ENST00000482158 SETQ01105 290 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-210ENST00000482158 CAPSQ13938 189 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 LPIN1Q14693 890 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 ALG11Q2TAA5 492 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 MZT2BQ6NZ67 158 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 C4orf50Q6ZRC1 276 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 NOXA1Q86UR1 476 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 ZNF575Q86XF7 245 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 CAMK1DQ8IU85 385 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 LURAP1LQ8IV03 231 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 ADSSL1Q8N142 457 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 DENND1AQ8TEH3 1009 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 SNAPC3Q92966 411 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 TMEM18Q96B42 140 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 PABPC5Q96DU9 382 aaKnown RBP5.97□□□□□ -1.45
SF3B1-210ENST00000482158 BARD1Q99728 777 aaKnown RBP5.97□□□□□ -1.45
SF3B1-210ENST00000482158 SIRT3Q9NTG7 399 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-210ENST00000482158 NDRG3Q9UGV2 375 aa5.97□□□□□ -1.45
SF3B1-210ENST00000482158 A0A1W2PQF6 199 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 I6L893 689 aaPredicted RBP5.96□□□□□ -1.46
SF3B1-210ENST00000482158 SNAP23O00161 211 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 PPEF2O14830 753 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 PTP4A3O75365 173 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 RNASEH2AO75792 299 aaKnown RBP5.96□□□□□ -1.46
SF3B1-210ENST00000482158 MLYCDO95822 493 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 TFP02787 698 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 MMP3P08254 477 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 PBX3P40426 434 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 CDH12P55289 794 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 FAM27E3Q08E93 113 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 VEPH1Q14D04 833 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 GSTA3Q16772 222 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 WASHC2DQ5SRD0 308 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 MANEAQ5SRI9 462 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 PXDC1Q5TGL8 231 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 PARM1Q6UWI2 310 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 PCGF5Q86SE9 256 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 TDRPQ86YL5 185 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 DENND6AQ8IWF6 608 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 GABPB2Q8TAK5 448 aaPredicted RBP5.96□□□□□ -1.46
SF3B1-210ENST00000482158 GPT2Q8TD30 523 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 INTS12Q96CB8 462 aaKnown RBP5.96□□□□□ -1.46
SF3B1-210ENST00000482158 TKTL2Q9H0I9 626 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 CDT1Q9H211 546 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 PLEKHA5Q9HAU0 1116 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 KRT84Q9NSB2 600 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 ANKRD10Q9NXR5 420 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 SLCO3A1Q9UIG8 710 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 CARD8Q9Y2G2 431 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 A3GALT2U3KPV4 340 aa5.96□□□□□ -1.46
SF3B1-210ENST00000482158 IGLV5-39A0A0G2JS06 123 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 LDB2O43679 373 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 DOK2O60496 412 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 MOSPD3O75425 235 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 SPARCP09486 303 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 ITGAXP20702 1163 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 GNLYP22749 145 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 CASP2P42575 452 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 RFX5P48382 616 aaPredicted RBP5.95□□□□□ -1.46
SF3B1-210ENST00000482158 GNAQP50148 359 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 OLR1P78380 273 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 TRAF1Q13077 416 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 RUNX2Q13950 521 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 EIF4A2Q14240 407 aaKnown RBP5.95□□□□□ -1.46
SF3B1-210ENST00000482158 PPP2R5BQ15173 497 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 HIST2H2ACQ16777 129 aaPredicted RBP5.95□□□□□ -1.46
SF3B1-210ENST00000482158 SOWAHAQ2M3V2 549 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 ESCO2Q56NI9 601 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 PRAMEF19Q5SWL8 479 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 NCAPH2Q6IBW4 605 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 CTU1Q7Z7A3 348 aaKnown RBP5.95□□□□□ -1.46
SF3B1-210ENST00000482158 MRPL10Q7Z7H8 261 aaKnown RBP5.95□□□□□ -1.46
SF3B1-210ENST00000482158 GJC3Q8NFK1 279 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 PSPC1Q8WXF1 523 aaKnown RBP5.95□□□□□ -1.46
SF3B1-210ENST00000482158 PCSK5Q92824 1860 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 SLC25A28Q96A46 364 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 URB1-AS1Q96HZ7 61 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 ZNF778Q96MU6 729 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 MXRA8Q9BRK3 442 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 H2AFJQ9BTM1 129 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 STRA6Q9BX79 667 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 ISCUQ9H1K1 167 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms