RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 MAXP61244 160 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 SNRPD1P62314 119 aaKnown RBP11.74□□□□□ -0.53
HPS4-212ENST00000481910 ENPP2Q13822 863 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 CLPPQ16740 277 aaPredicted RBP11.74□□□□□ -0.53
HPS4-212ENST00000481910 ANKRD20A2Q5SQ80 823 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 ANKRD20A1Q5TYW2 823 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 ANKRD20A3Q5VUR7 823 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 Q6ZS52 159 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 Q6ZVU0 165 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 CTAGE6Q86UF2 777 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 CTAGE4Q8IX94 777 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 PGBD5Q8N414 524 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 PCDH20Q8N6Y1 951 aaKnown RBP11.74□□□□□ -0.53
HPS4-212ENST00000481910 CEP112Q8N8E3 955 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 TXNDC5Q8NBS9 432 aaKnown RBP11.74□□□□□ -0.53
HPS4-212ENST00000481910 FAM81AQ8TBF8 368 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 CCDC110Q8TBZ0 833 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 GRK7Q8WTQ7 553 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 TEKT5Q96M29 485 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 KRT12Q99456 494 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 OSBPL6Q9BZF3 934 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 LHX3Q9UBR4 397 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 PCYOX1Q9UHG3 505 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 AMACRQ9UHK6 382 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 TRHDEQ9UKU6 1024 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 EDDM13A0A1B0GTR0 161 aa11.73□□□□□ -0.53
HPS4-212ENST00000481910 C5orf60A6NFR6 353 aa11.73□□□□□ -0.53
HPS4-212ENST00000481910 GOLGA6L10A6NI86 522 aa11.73□□□□□ -0.53
HPS4-212ENST00000481910 MUSKO15146 869 aa11.73□□□□□ -0.53
HPS4-212ENST00000481910 ZBTB24O43167 697 aaPredicted RBP11.73□□□□□ -0.53
HPS4-212ENST00000481910 GCATO75600 419 aa11.73□□□□□ -0.53
HPS4-212ENST00000481910 PDGFBP01127 241 aaPredicted RBP11.73□□□□□ -0.53
HPS4-212ENST00000481910 HSPA9P38646 679 aaKnown RBP11.73□□□□□ -0.53
HPS4-212ENST00000481910 SCNN1BP51168 640 aa11.73□□□□□ -0.53
HPS4-212ENST00000481910 CCNHP51946 323 aaPredicted RBP11.73□□□□□ -0.53
HPS4-212ENST00000481910 NSUN2Q08J23 767 aaKnown RBP eCLIP11.73□□□□□ -0.53
HPS4-212ENST00000481910 KCTD19Q17RG1 926 aaPredicted RBP11.73□□□□□ -0.53
HPS4-212ENST00000481910 HNRNPA1L2Q32P51 320 aaKnown RBP11.73□□□□□ -0.53
HPS4-212ENST00000481910 HSF5Q4G112 596 aaPredicted RBP11.73□□□□□ -0.53
HPS4-212ENST00000481910 CARD16Q5EG05 197 aa11.73□□□□□ -0.53
HPS4-212ENST00000481910 ATXN7L2Q5T6C5 722 aaPredicted RBP11.73□□□□□ -0.53
HPS4-212ENST00000481910 PRUNE1Q86TP1 453 aa11.73□□□□□ -0.53
HPS4-212ENST00000481910 RYBPQ8N488 228 aaPredicted RBP11.73□□□□□ -0.53
HPS4-212ENST00000481910 OR2AP1Q8NGE2 309 aa11.73□□□□□ -0.53
HPS4-212ENST00000481910 NACC2Q96BF6 587 aa11.73□□□□□ -0.53
HPS4-212ENST00000481910 ERLEC1Q96DZ1 483 aa11.73□□□□□ -0.53
HPS4-212ENST00000481910 GDAP1L1Q96MZ0 367 aa11.73□□□□□ -0.53
HPS4-212ENST00000481910 RUNDC3BQ96NL0 473 aa11.73□□□□□ -0.53
HPS4-212ENST00000481910 POLR1EQ9GZS1 481 aaKnown RBP11.73□□□□□ -0.53
HPS4-212ENST00000481910 L2HGDHQ9H9P8 463 aa11.73□□□□□ -0.53
HPS4-212ENST00000481910 FARP1Q9Y4F1 1045 aaPredicted RBP11.73□□□□□ -0.53
HPS4-212ENST00000481910 TECTAO75443 2155 aa11.73□□□□□ -0.53
HPS4-212ENST00000481910 TTC24A2A3L6 582 aaPredicted RBP11.72□□□□□ -0.53
HPS4-212ENST00000481910 SYNCRIPO60506 623 aaKnown RBP11.72□□□□□ -0.53
HPS4-212ENST00000481910 ADAM23O75077 832 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 IGSF6O95976 241 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 GAS8O95995 478 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 ETS1P14921 441 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 RGRP47804 291 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 TRIP13Q15645 432 aaPredicted RBP11.72□□□□□ -0.53
HPS4-212ENST00000481910 P3H1Q32P28 736 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 EOGTQ5NDL2 527 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 C9orf64Q5T6V5 341 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 DPY19L3Q6ZPD9 716 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 ARHGEF18Q6ZSZ5 1173 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 GLIS1Q8NBF1 620 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 OR2A12Q8NGT7 310 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 RTP4Q96DX8 246 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 SPATA13Q96N96 652 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 GABRG3Q99928 467 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 SEMA3CQ99985 751 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 MGME1Q9BQP7 344 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 REPIN1Q9BWE0 567 aaKnown RBP11.72□□□□□ -0.53
HPS4-212ENST00000481910 CARD6Q9BX69 1037 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 BATF3Q9NR55 127 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 HECAQ9UBI9 543 aaPredicted RBP11.72□□□□□ -0.53
HPS4-212ENST00000481910 MUC22E2RYF6 1773 aaPredicted RBP11.72□□□□□ -0.53
HPS4-212ENST00000481910 VCANP13611 3396 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 TARSL2A2RTX5 802 aaKnown RBP11.72□□□□□ -0.53
HPS4-212ENST00000481910 TMEM221A6NGB7 291 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 M0R296 226 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 OPHN1O60890 802 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 ATG13O75143 517 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 SIN3BO75182 1162 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 MTRF1O75570 445 aaKnown RBP11.72□□□□□ -0.53
HPS4-212ENST00000481910 POP4O95707 220 aaKnown RBP11.72□□□□□ -0.53
HPS4-212ENST00000481910 GSRP00390 522 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 DCNP07585 359 aaKnown RBP11.72□□□□□ -0.53
HPS4-212ENST00000481910 ZSCAN5DPP0CG00 497 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 HOXB2P14652 356 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 CD68P34810 354 aaPredicted RBP11.72□□□□□ -0.53
HPS4-212ENST00000481910 DR1Q01658 176 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 DSC2Q02487 901 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 STARD3Q14849 445 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 PPP1R7Q15435 360 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 FXNQ16595 210 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 ITPRIPL1Q6GPH6 555 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 PKN3Q6P5Z2 889 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 PLPP6Q8IY26 295 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 OR6K2Q8NGY2 324 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms