RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 TRPS1Q9UHF7 1281 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 RAPGEFL1Q9UHV5 662 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 DMGDHQ9UI17 866 aaKnown RBP9.62□□□□□ -0.87
VEGFA-212ENST00000480614 FAM92AA1XBS5 289 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 PLK4O00444 970 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 PGRMC2O15173 223 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 IL12AP29459 219 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 IRF8Q02556 426 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 CCNIQ14094 377 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 TFAP2DQ7Z6R9 452 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 TSPAN14Q8NG11 270 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 ZNF75CPQ92670 426 aaPredicted RBP9.62□□□□□ -0.87
VEGFA-212ENST00000480614 TIFAQ96CG3 184 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 ATG2BQ96BY7 2078 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 EPHX2P34913 555 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 OMPP47874 163 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 HERVK_113P62684 666 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 COMMD3-BMI1R4GMX3 469 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 RGSL1A5PLK6 1076 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 DCXO43602 365 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 OTCP00480 354 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 CHKAP35790 457 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 PYDC2Q56P42 97 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 KLHL23Q8NBE8 558 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 EDEM1Q92611 657 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 FDXACB1Q9BRP7 624 aaPredicted RBP9.62□□□□□ -0.87
VEGFA-212ENST00000480614 CHCHD6Q9BRQ6 235 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 CHKBQ9Y259 395 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 DNAJA2O60884 412 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 ENDOD1O94919 500 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 EPORP19235 508 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 TAS2R41P59536 307 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 WNT8BQ93098 351 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 XPNPEP3Q9NQH7 507 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 CCDC167Q9P0B6 97 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 DIP2BQ9P265 1576 aa9.62□□□□□ -0.87
VEGFA-212ENST00000480614 GTPBP1O00178 669 aaKnown RBP9.61□□□□□ -0.87
VEGFA-212ENST00000480614 PARNO95453 639 aaKnown RBP9.61□□□□□ -0.87
VEGFA-212ENST00000480614 MARSP56192 900 aaKnown RBP9.61□□□□□ -0.87
VEGFA-212ENST00000480614 LRRC17Q8N6Y2 441 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 ELMO1Q92556 727 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 L1RE1Q9UN81 338 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 FAM86C2PA6NEL3 165 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 SLC26A3P40879 764 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 PDX1P52945 283 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 TSHZ1Q6ZSZ6 1077 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 USP49Q70CQ1 688 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 VPS35Q96QK1 796 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 TIMMDC1Q9NPL8 285 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 ZNF780BQ9Y6R6 833 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 CTDNEP1O95476 244 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 ADH1CP00326 375 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 IDH2P48735 452 aaKnown RBP9.61□□□□□ -0.87
VEGFA-212ENST00000480614 PGM5Q15124 567 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 ANXA8L1Q5VT79 327 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 FAM171BQ6P995 826 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 RIOX1Q9H6W3 641 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 FARP2O94887 1054 aaPredicted RBP9.61□□□□□ -0.87
VEGFA-212ENST00000480614 SRP54P61011 504 aaKnown RBP9.61□□□□□ -0.87
VEGFA-212ENST00000480614 MYBPC3Q14896 1274 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 NR1D2Q14995 579 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 KAT5Q92993 513 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 IFNA16P05015 189 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 INSRRP14616 1297 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 ORC1Q13415 861 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 MNTQ99583 582 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 FBXO28Q9NVF7 368 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 SLC6A2P23975 617 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 RPL4P36578 427 aaKnown RBP9.61□□□□□ -0.87
VEGFA-212ENST00000480614 GSSP48637 474 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 HSF2Q03933 536 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 MAPKAPK3Q16644 382 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 STXBP5Q5T5C0 1151 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 PACS2Q86VP3 889 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 SNTG2Q9NY99 539 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 PRPF19Q9UMS4 504 aaKnown RBP9.61□□□□□ -0.87
VEGFA-212ENST00000480614 SSR3Q9UNL2 185 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 BMPR2Q13873 1038 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 HECTD3Q5T447 861 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 PSTKQ8IV42 348 aaKnown RBP9.61□□□□□ -0.87
VEGFA-212ENST00000480614 POP1Q99575 1024 aaKnown RBP9.61□□□□□ -0.87
VEGFA-212ENST00000480614 DCUN1D5Q9BTE7 237 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 FNDC11Q9BVV2 318 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 ALG9Q9H6U8 611 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 RASSF1Q9NS23 344 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 GPATCH2LQ9NWQ4 482 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 MAP10Q9P2G4 905 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 TNFSF13BQ9Y275 285 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 FGF1P05230 155 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 NR1H2P55055 460 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 HELQQ8TDG4 1101 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 MCUBQ9NWR8 336 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 GPN3Q9UHW5 284 aaPredicted RBP9.61□□□□□ -0.87
VEGFA-212ENST00000480614 KCNE2Q9Y6J6 123 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 BBIP1A8MTZ0 92 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 TPP1O14773 563 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 RGL2O15211 777 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 SUV39H1O43463 412 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 ITCHQ96J02 903 aa9.61□□□□□ -0.87
VEGFA-212ENST00000480614 KCNN2Q9H2S1 579 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms