RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 COPS7BQ9H9Q2 264 aaPredicted RBP10.91□□□□□ -0.66
VPS52-217ENST00000478934 RRN3Q9NYV6 651 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 FBXO5Q9UKT4 447 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 PRG3Q9Y2Y8 225 aaPredicted RBP10.91□□□□□ -0.66
VPS52-217ENST00000478934 GPR182O15218 404 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 AHCYL1O43865 530 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 PEX11BO96011 259 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 ASGR1P07306 291 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 PIRTP0C851 137 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 ARSDP51689 593 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 NSUN2Q08J23 767 aaKnown RBP eCLIP10.91□□□□□ -0.66
VPS52-217ENST00000478934 FRG1Q14331 258 aaKnown RBP10.91□□□□□ -0.66
VPS52-217ENST00000478934 CNPY1Q3B7I2 92 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 FSCBQ5H9T9 825 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 NEPROQ6NW34 567 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 PIM3Q86V86 326 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 MIB1Q86YT6 1006 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 GALNT4Q8N4A0 578 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 KDM1BQ8NB78 822 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 KLHDC9Q8NEP7 349 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 NR1H4Q96RI1 486 aaPredicted RBP10.91□□□□□ -0.66
VPS52-217ENST00000478934 TRIM4Q9C037 500 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 ABCC13Q9NSE7 274 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 TREX1Q9NSU2 369 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 GTSE1Q9NYZ3 720 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 A0A0U1RQF3 1178 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 UNCXA6NJT0 531 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 M0QZQ0 153 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 CABYRO75952 493 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 IGHA2P01877 340 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 SPATA31D3P0C874 917 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 MYL4P12829 197 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 UQCRBP14927 111 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 GSTT1P30711 240 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 ARPP19P56211 112 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 COG7P83436 770 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 FOLH1Q04609 750 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 CRHR2Q13324 411 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 CEACAM7Q14002 265 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 KCNA10Q16322 511 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 PSMD5Q16401 504 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 AAGABQ6PD74 315 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 TMEM207Q6UWW9 146 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 GK5Q6ZS86 529 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 TRIM67Q6ZTA4 783 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 SPATA31D4Q6ZUB0 917 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 KBTBD6Q86V97 674 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 RASAL3Q86YV0 1011 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 PCDH20Q8N6Y1 951 aaKnown RBP10.9□□□□□ -0.66
VPS52-217ENST00000478934 PSMG2Q969U7 264 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 TSNARE1Q96NA8 513 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 HAPLN3Q96S86 360 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 RTKNQ9BST9 563 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 IGSF5Q9NSI5 407 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 MARCH4Q9P2E8 410 aaPredicted RBP10.9□□□□□ -0.66
VPS52-217ENST00000478934 DNAJB4Q9UDY4 337 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 NOD1Q9Y239 953 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 COPG1Q9Y678 874 aaKnown RBP10.9□□□□□ -0.66
VPS52-217ENST00000478934 KCNU1A8MYU2 1149 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 ANXA9O76027 345 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 CYP11A1P05108 521 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 PRSS56P0CW18 603 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 ALDH1A3P47895 512 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 YWHAHQ04917 246 aaPredicted RBP10.9□□□□□ -0.66
VPS52-217ENST00000478934 EFEMP1Q12805 493 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 TUSC3Q13454 348 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 FLOT2Q14254 428 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 TLR1Q15399 786 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 GSTA3Q16772 222 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 CWF19L1Q69YN2 538 aaKnown RBP10.9□□□□□ -0.66
VPS52-217ENST00000478934 RTN4RL1Q86UN2 441 aaPredicted RBP10.9□□□□□ -0.66
VPS52-217ENST00000478934 ATAD1Q8NBU5 361 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 BHLHE22Q8NFJ8 381 aaPredicted RBP10.9□□□□□ -0.66
VPS52-217ENST00000478934 IGSF8Q969P0 613 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 SMOC2Q9H3U7 446 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 NYNRINQ9P2P1 1898 aaKnown RBP10.9□□□□□ -0.66
VPS52-217ENST00000478934 HCSTQ9UBK5 93 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 SLC27A5Q9Y2P5 690 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 CRYL1Q9Y2S2 319 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 Q9Y3F1 56 aa10.9□□□□□ -0.66
VPS52-217ENST00000478934 ATP6AP2A0A1C7CYW4 349 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 RGSL1A5PLK6 1076 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 ATP6AP2O75787 350 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 CPB1P15086 417 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 CCND3P30281 292 aaPredicted RBP10.89□□□□□ -0.67
VPS52-217ENST00000478934 CD151P48509 253 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 MLLT6P55198 1093 aaPredicted RBP10.89□□□□□ -0.67
VPS52-217ENST00000478934 INHBEP58166 350 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 C1QTNF8P60827 252 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 FKBP1BP68106 108 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 TSPY1Q01534 308 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 PRKAA1Q13131 559 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 CYLC2Q14093 348 aaPredicted RBP10.89□□□□□ -0.67
VPS52-217ENST00000478934 PDK3Q15120 406 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 FBXO48Q5FWF7 155 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 KDELC1Q6UW63 502 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 CNTN4Q8IWV2 1026 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 LILRA2Q8N149 483 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 GALNT15Q8N3T1 639 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 RTL3Q8N8U3 475 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms