RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 THUMPD1Q9NXG2 353 aaKnown RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 TAB2Q9NYJ8 693 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 RAB21Q9UL25 225 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 METP08581 1390 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 PIK3C2GO75747 1445 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 CPSF1Q10570 1443 aaKnown RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 YY2O15391 372 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 CLEC3AO75596 197 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 TCEA3O75764 348 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 BBOX1O75936 387 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 ATXN8OSP0DMR3 200 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 CHRNB2P17787 502 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 BDNFP23560 247 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 RORAP35398 523 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 CCR4P51679 360 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 ZNF200P98182 395 aaPredicted RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 CUL2Q13617 745 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 PAOXQ6QHF9 649 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 ZNF550Q7Z398 422 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 GPR135Q8IZ08 494 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 PIGOQ8TEQ8 1089 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 DNAJC9Q8WXX5 260 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 PPP1R10Q96QC0 940 aaKnown RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 PFDN5Q99471 154 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 ZNF251Q9BRH9 671 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 RNF26Q9BY78 433 aaPredicted RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 PDGFDQ9GZP0 370 aaPredicted RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 SERINC1Q9NRX5 453 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 C3orf18Q9UK00 162 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 PCDHA4Q9UN74 947 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 PSMD13Q9UNM6 376 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 ADAMTS8Q9UP79 889 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 CITO14578 2027 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 ABCC4O15439 1325 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 SCAF11Q99590 1463 aaKnown RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 KANTRA0A1W2PQU2 76 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 SH2D7A6NKC9 451 aaPredicted RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 SLC31A2O15432 143 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 PCNAP12004 261 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 MC3RP41968 323 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 TUFMP49411 452 aaKnown RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 TUBA1BP68363 451 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 NOMO3P69849 1222 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 SCN1BQ07699 218 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 ARL16Q0P5N6 197 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 IKBKEQ14164 716 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 NOMO1Q15155 1222 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 NOTUMQ6P988 496 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 TUBA1AQ71U36 451 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 P4HA3Q7Z4N8 544 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 IQCKQ8N0W5 287 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 FNIP1Q8TF40 1166 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 KLHL5Q96PQ7 755 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 TLR10Q9BXR5 811 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 RNPEPQ9H4A4 650 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 POMKQ9H5K3 350 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 NDOR1Q9UHB4 597 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 PLAAQ9Y263 795 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 MAN2B2Q9Y2E5 1009 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 OR10H1Q9Y4A9 318 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 FAM25EA8MYX2 175 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 C9J4A7 227 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 FARS2O95363 451 aaKnown RBP5.46□□□□□ -1.53
USF3-202ENST00000478658 CLPTM1O96005 669 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 PLGP00747 810 aaPredicted RBP5.46□□□□□ -1.53
USF3-202ENST00000478658 ORM1P02763 201 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 IL1R1P14778 569 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 RAB4AP20338 218 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 GNA15P30679 374 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 MATKP42679 507 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 MAGEA12P43365 314 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 ART1P52961 327 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 ZNF92Q03936 586 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 MBTD1Q05BQ5 628 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 SULT2A1Q06520 285 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 SLC13A2Q13183 592 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 ACVR2BQ13705 512 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 SLC39A14Q15043 492 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 SLFN13Q68D06 897 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 FAM43BQ6ZT52 329 aaPredicted RBP5.46□□□□□ -1.53
USF3-202ENST00000478658 RIOX2Q8IUF8 465 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 RDH10Q8IZV5 341 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 OR2L8Q8NGY9 312 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 NSUN6Q8TEA1 469 aaKnown RBP5.46□□□□□ -1.53
USF3-202ENST00000478658 NR4A3Q92570 626 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 PRCCQ92733 491 aaPredicted RBP5.46□□□□□ -1.53
USF3-202ENST00000478658 KCNN1Q92952 543 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 E2F7Q96AV8 911 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 ART5Q96L15 291 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 TASP1Q9H6P5 420 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 TM9SF3Q9HD45 589 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 PAK6Q9NQU5 681 aaPredicted RBP5.46□□□□□ -1.53
USF3-202ENST00000478658 TMEM184CQ9NVA4 438 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 NCKIPSDQ9NZQ3 722 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 PTPN23Q9H3S7 1636 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 SCN8AQ9UQD0 1980 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 MAP3K1Q13233 1512 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 A0A096LPK6 155 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 A6NHS1 94 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 GPR182O15218 404 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms