RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 SAC3D1A6NKF1 404 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 RPL17P18621 184 aaKnown RBP14.32□□□□□ -0.12
NPHP4-208ENST00000478423 IL1R2P27930 398 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 TRAF2Q12933 501 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 CYP1B1Q16678 543 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 FAM187BQ17R55 369 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 DET1Q7L5Y6 550 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 SELENOMQ8WWX9 145 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 GTF2IRD1Q9UHL9 959 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 SYN3O14994 580 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 EOMESO95936 686 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 MT-CYBP00156 380 aaPredicted RBP14.32□□□□□ -0.12
NPHP4-208ENST00000478423 TCF4P15884 667 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 FASP25445 335 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 VAC14Q08AM6 782 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 SAMD4BQ5PRF9 694 aaKnown RBP14.32□□□□□ -0.12
NPHP4-208ENST00000478423 OTUD3Q5T2D3 398 aaPredicted RBP14.32□□□□□ -0.12
NPHP4-208ENST00000478423 LIPMQ5VYY2 423 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 RHBDF2Q6PJF5 856 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 MARK2Q7KZI7 788 aaKnown RBP14.32□□□□□ -0.12
NPHP4-208ENST00000478423 CMASQ8NFW8 434 aaPredicted RBP14.32□□□□□ -0.12
NPHP4-208ENST00000478423 NR1H4Q96RI1 486 aaPredicted RBP14.32□□□□□ -0.12
NPHP4-208ENST00000478423 EXOSC4Q9NPD3 245 aaKnown RBP14.32□□□□□ -0.12
NPHP4-208ENST00000478423 PACSIN3Q9UKS6 424 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 PADI4Q9UM07 663 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 BPGMP07738 259 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 ABCB1P08183 1280 aaPredicted RBP14.31□□□□□ -0.12
NPHP4-208ENST00000478423 PPP1R15BQ5SWA1 713 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 SYPL2Q5VXT5 272 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 CDCA2Q69YH5 1023 aaPredicted RBP14.31□□□□□ -0.12
NPHP4-208ENST00000478423 SCIMPQ6UWF3 145 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 ELMO1Q92556 727 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 FIG4Q92562 907 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 MMADHCQ9H3L0 296 aaPredicted RBP14.31□□□□□ -0.12
NPHP4-208ENST00000478423 PLLPQ9Y342 182 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 PHRF1Q9P1Y6 1649 aaKnown RBP14.31□□□□□ -0.12
NPHP4-208ENST00000478423 GCATO75600 419 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 RGS20O76081 388 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 LAG3P18627 525 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 TACR2P21452 398 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 ELF3P78545 371 aaPredicted RBP14.31□□□□□ -0.12
NPHP4-208ENST00000478423 DYNC1I2Q13409 638 aaKnown RBP14.31□□□□□ -0.12
NPHP4-208ENST00000478423 PARP15Q460N3 678 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 NPAS4Q8IUM7 802 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 CRYBG2Q8N1P7 616 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 CDYL2Q8N8U2 506 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 ZSCAN18Q8TBC5 510 aaPredicted RBP14.31□□□□□ -0.12
NPHP4-208ENST00000478423 CFAP97Q9P2B7 532 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 KCNU1A8MYU2 1149 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 RGS14O43566 566 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 VPS4BO75351 444 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 ATG7O95352 703 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 F2P00734 622 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 TKTP29401 623 aaKnown RBP14.31□□□□□ -0.12
NPHP4-208ENST00000478423 LRPAP1P30533 357 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 ZNF792Q3KQV3 632 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 DCAF12L1Q5VU92 463 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 CLEC20AQ6ZU45 233 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 RBM23Q86U06 439 aaKnown RBP14.31□□□□□ -0.12
NPHP4-208ENST00000478423 MICU2Q8IYU8 434 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 OR4K2Q8NGD2 314 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 SLC35B2Q8TB61 432 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 TMEM109Q9BVC6 243 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 AHSPQ9NZD4 102 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 NR2E3Q9Y5X4 410 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 SPACA6W5XKT8 324 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.31□□□□□ -0.12
NPHP4-208ENST00000478423 CCNCP24863 283 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 MC4RP32245 332 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 TMEM110Q86TL2 294 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 SPOCK2Q92563 424 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 COPS8Q99627 209 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 NFKBIZQ9BYH8 718 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 GBA3Q9H227 469 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 PDP2Q9P2J9 529 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 GNPTGQ9UJJ9 305 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 FBXW11Q9UKB1 542 aa14.31□□□□□ -0.12
NPHP4-208ENST00000478423 FFAR3O14843 346 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 GPR42O15529 346 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 IL1BP01584 269 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 CES1P23141 567 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 PTPN3P26045 913 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 CDC25CP30307 473 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 S100A3P33764 101 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 CLK1P49759 484 aaKnown RBP14.3□□□□□ -0.12
NPHP4-208ENST00000478423 NRLP54845 237 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 MRPS22P82650 360 aaKnown RBP14.3□□□□□ -0.12
NPHP4-208ENST00000478423 DSC2Q02487 901 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 GRB14Q14449 540 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 ZNF618Q5T7W0 954 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 PLPP4Q5VZY2 271 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 CCDC81Q6ZN84 652 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 ADAMTSL2Q86TH1 951 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 METTL3Q86U44 580 aaKnown RBP14.3□□□□□ -0.12
NPHP4-208ENST00000478423 BBS7Q8IWZ6 715 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 NIPA2Q8N8Q9 360 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 OR7D4Q8NG98 312 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 VPS33AQ96AX1 596 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 PCYT2Q99447 389 aa14.3□□□□□ -0.12
NPHP4-208ENST00000478423 SLC4A5Q9BY07 1137 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms