RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 GLMNQ92990 594 aa11.91□□□□□ -0.5
CPSF7-211ENST00000477890 VOPP1Q96AW1 172 aa11.91□□□□□ -0.5
CPSF7-211ENST00000477890 CENPTQ96BT3 561 aa11.91□□□□□ -0.5
CPSF7-211ENST00000477890 GDAP1L1Q96MZ0 367 aa11.91□□□□□ -0.5
CPSF7-211ENST00000477890 LRRC61Q9BV99 259 aa11.91□□□□□ -0.5
CPSF7-211ENST00000477890 BOCQ9BWV1 1114 aa11.91□□□□□ -0.5
CPSF7-211ENST00000477890 DPH1Q9BZG8 443 aa11.91□□□□□ -0.5
CPSF7-211ENST00000477890 SLC13A1Q9BZW2 595 aa11.91□□□□□ -0.5
CPSF7-211ENST00000477890 GANQ9H2C0 597 aa11.91□□□□□ -0.5
CPSF7-211ENST00000477890 TAB2Q9NYJ8 693 aa11.91□□□□□ -0.5
CPSF7-211ENST00000477890 PNMA8BQ9ULN7 279 aaPredicted RBP11.91□□□□□ -0.5
CPSF7-211ENST00000477890 NEU3Q9UQ49 428 aa11.91□□□□□ -0.5
CPSF7-211ENST00000477890 ENTPD2Q9Y5L3 495 aa11.91□□□□□ -0.5
CPSF7-211ENST00000477890 ZSCAN5CA6NGD5 496 aaPredicted RBP11.9□□□□□ -0.5
CPSF7-211ENST00000477890 KDELR3O43731 214 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 TCEA3O75764 348 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 TMCC1O94876 653 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 IGSF6O95976 241 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 CHRNB2P17787 502 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 ITIH2P19823 946 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 EEF1GP26641 437 aaKnown RBP11.9□□□□□ -0.5
CPSF7-211ENST00000477890 EIF4A3P38919 411 aaKnown RBP11.9□□□□□ -0.5
CPSF7-211ENST00000477890 PTPN9P43378 593 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 KLK7P49862 253 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 HDAC4P56524 1084 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 POLR2FP61218 127 aaKnown RBP11.9□□□□□ -0.5
CPSF7-211ENST00000477890 YPEL5P62699 121 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 KLHL40Q2TBA0 621 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 LRRK1Q38SD2 2015 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 C6orf132Q5T0Z8 1188 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 IGF2-ASQ6U949 168 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 SLC35F3Q8IY50 421 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 FAM172AQ8WUF8 416 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 GRAMD1AQ96CP6 724 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 SLC46A1Q96NT5 459 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 EPAS1Q99814 870 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 CCDC3Q9BQI4 270 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.9□□□□□ -0.5
CPSF7-211ENST00000477890 WRAP53Q9BUR4 548 aaKnown RBP11.9□□□□□ -0.5
CPSF7-211ENST00000477890 C1QTNF7Q9BXJ2 289 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 TTYH3Q9C0H2 523 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 SYNDIG1Q9H7V2 258 aa11.9□□□□□ -0.5
CPSF7-211ENST00000477890 MBNL1Q9NR56 388 aaKnown RBP11.9□□□□□ -0.5
CPSF7-211ENST00000477890 MGAQ8IWI9 3026 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 PMS2P1A4D2B8 440 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 LMO7DNF2Z398 122 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 TOR1BO14657 336 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 CASC3O15234 703 aaKnown RBP11.89□□□□□ -0.51
CPSF7-211ENST00000477890 YY2O15391 372 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 KRT3P12035 628 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 TSHRP16473 764 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 EPHB2P29323 1055 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 RFC1P35251 1148 aaPredicted RBP11.89□□□□□ -0.51
CPSF7-211ENST00000477890 SOX5P35711 763 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 NSFP46459 744 aaKnown RBP11.89□□□□□ -0.51
CPSF7-211ENST00000477890 RHOAP61586 193 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 PPARDQ03181 441 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 VAC14Q08AM6 782 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 SPIDRQ14159 915 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 ESRP1Q6NXG1 681 aaKnown RBP11.89□□□□□ -0.51
CPSF7-211ENST00000477890 MACC1Q6ZN28 852 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 SLFN11Q7Z7L1 901 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 PYROXD2Q8N2H3 581 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 RTL3Q8N8U3 475 aaKnown RBP11.89□□□□□ -0.51
CPSF7-211ENST00000477890 TP53I13Q8NBR0 393 aaPredicted RBP11.89□□□□□ -0.51
CPSF7-211ENST00000477890 CENPIQ92674 756 aaPredicted RBP11.89□□□□□ -0.51
CPSF7-211ENST00000477890 NAT6Q93015 286 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 NTAN1Q96AB6 310 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 PRR11Q96HE9 360 aaPredicted RBP11.89□□□□□ -0.51
CPSF7-211ENST00000477890 TBATAQ96M53 351 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 SELENOOQ9BVL4 669 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 CLPBQ9H078 707 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 KLC2Q9H0B6 622 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 VPS16Q9H269 839 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 NOL6Q9H6R4 1146 aaKnown RBP11.89□□□□□ -0.51
CPSF7-211ENST00000477890 NLRC4Q9NPP4 1024 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 FAM207AQ9NSI2 230 aaPredicted RBP11.89□□□□□ -0.51
CPSF7-211ENST00000477890 PADI4Q9UM07 663 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 DOLKQ9UPQ8 538 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 COQ6Q9Y2Z9 468 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 PCDHGA8Q9Y5G5 932 aa11.89□□□□□ -0.51
CPSF7-211ENST00000477890 KALRNO60229 2985 aa11.88□□□□□ -0.51
CPSF7-211ENST00000477890 CAPN8A6NHC0 703 aa11.88□□□□□ -0.51
CPSF7-211ENST00000477890 INSIG1O15503 277 aa11.88□□□□□ -0.51
CPSF7-211ENST00000477890 CREB3O43889 395 aa11.88□□□□□ -0.51
CPSF7-211ENST00000477890 TNFSF15O95150 251 aa11.88□□□□□ -0.51
CPSF7-211ENST00000477890 CELA2BP08218 269 aaPredicted RBP11.88□□□□□ -0.51
CPSF7-211ENST00000477890 UNGP13051 313 aaPredicted RBP11.88□□□□□ -0.51
CPSF7-211ENST00000477890 TIMP2P16035 220 aa11.88□□□□□ -0.51
CPSF7-211ENST00000477890 GPD1P21695 349 aa11.88□□□□□ -0.51
CPSF7-211ENST00000477890 XPAP23025 273 aaPredicted RBP11.88□□□□□ -0.51
CPSF7-211ENST00000477890 BLKP51451 505 aa11.88□□□□□ -0.51
CPSF7-211ENST00000477890 JAM2P57087 298 aa11.88□□□□□ -0.51
CPSF7-211ENST00000477890 PTP4A2Q12974 167 aa11.88□□□□□ -0.51
CPSF7-211ENST00000477890 IRF4Q15306 451 aa11.88□□□□□ -0.51
CPSF7-211ENST00000477890 TCEA2Q15560 299 aa11.88□□□□□ -0.51
CPSF7-211ENST00000477890 INO80DQ53TQ3 878 aaPredicted RBP11.88□□□□□ -0.51
CPSF7-211ENST00000477890 SCYL2Q6P3W7 929 aa11.88□□□□□ -0.51
CPSF7-211ENST00000477890 WDR59Q6PJI9 974 aa11.88□□□□□ -0.51
CPSF7-211ENST00000477890 TRIM72Q6ZMU5 477 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms