RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-210ENST00000477625 PCDH18Q9HCL0 1135 aa12.39□□□□□ -0.43
PTPN7-210ENST00000477625 ETNK2Q9NVF9 386 aa12.39□□□□□ -0.43
PTPN7-210ENST00000477625 LCMT1Q9UIC8 334 aa12.39□□□□□ -0.43
PTPN7-210ENST00000477625 APOBEC2Q9Y235 224 aaKnown RBP12.39□□□□□ -0.43
PTPN7-210ENST00000477625 TMEM131Q92545 1883 aa12.39□□□□□ -0.43
PTPN7-210ENST00000477625 DOCK9Q9BZ29 2069 aa12.39□□□□□ -0.43
PTPN7-210ENST00000477625 CEP295Q9C0D2 2601 aa12.39□□□□□ -0.43
PTPN7-210ENST00000477625 SPINT1O43278 529 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 TNFSF14O43557 240 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 PROSCO94903 275 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 TMEM253P0C7T8 217 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 IL4RP24394 825 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 EPHA8P29322 1005 aaPredicted RBP12.38□□□□□ -0.43
PTPN7-210ENST00000477625 SUOXP51687 545 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 BNIP3Q12983 259 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 KRT81Q14533 505 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 SARM1Q6SZW1 724 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 GCNT7Q6ZNI0 430 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 Q6ZSR6 202 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 RAB44Q7Z6P3 723 aaPredicted RBP12.38□□□□□ -0.43
PTPN7-210ENST00000477625 SRLQ86TD4 932 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 DCP2Q8IU60 420 aaKnown RBP12.38□□□□□ -0.43
PTPN7-210ENST00000477625 CNGA4Q8IV77 575 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 TP53INP2Q8IXH6 220 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 CHCHD4Q8N4Q1 142 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 PNPLA1Q8N8W4 532 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 OR13H1Q8NG92 308 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 FAM71BQ8TC56 605 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 ADAMTS14Q8WXS8 1223 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 BMFQ96LC9 184 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 ZNF599Q96NL3 588 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 TUBGCP5Q96RT8 1024 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 CINPQ9BW66 212 aaPredicted RBP12.38□□□□□ -0.43
PTPN7-210ENST00000477625 NHEJ1Q9H9Q4 299 aaPredicted RBP12.38□□□□□ -0.43
PTPN7-210ENST00000477625 KLHL11Q9NVR0 708 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 RCOR3Q9P2K3 495 aaPredicted RBP12.38□□□□□ -0.43
PTPN7-210ENST00000477625 GGT7Q9UJ14 662 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 ITM2BQ9Y287 266 aa12.38□□□□□ -0.43
PTPN7-210ENST00000477625 TRPM6Q9BX84 2022 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 TSPAN11A1L157 253 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 FAM221BA6H8Z2 402 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 A6NNZ2 444 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 AKR1B15C9JRZ8 316 aaPredicted RBP12.37□□□□□ -0.43
PTPN7-210ENST00000477625 FPGTO14772 594 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 RAD51BO15315 384 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 BUB1BO60566 1050 aaPredicted RBP12.37□□□□□ -0.43
PTPN7-210ENST00000477625 MAFKO60675 156 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 MMP20O60882 483 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 PIGNO95427 931 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 ATXN1LP0C7T5 689 aaKnown RBP12.37□□□□□ -0.43
PTPN7-210ENST00000477625 ITIH2P19823 946 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 XPAP23025 273 aaPredicted RBP12.37□□□□□ -0.43
PTPN7-210ENST00000477625 RGRP47804 291 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 RENBPP51606 427 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 ARSEP51690 589 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 CDH6P55285 790 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 SLC10A7Q0GE19 358 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 TBX2Q13207 712 aaPredicted RBP12.37□□□□□ -0.43
PTPN7-210ENST00000477625 LBRQ14739 615 aaKnown RBP12.37□□□□□ -0.43
PTPN7-210ENST00000477625 UGP2Q16851 508 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 ATP13A4Q4VNC1 1196 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 LRRC73Q5JTD7 316 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 BRAT1Q6PJG6 821 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 CAMK1DQ8IU85 385 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 CENPTQ96BT3 561 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 PSKH2Q96QS6 385 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 KLF6Q99612 283 aaPredicted RBP12.37□□□□□ -0.43
PTPN7-210ENST00000477625 CALN1Q9BXU9 219 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 TRIM5Q9C035 493 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 ATP13A3Q9H7F0 1226 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 TOR4AQ9NXH8 423 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 FTSJ1Q9UET6 329 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 SEPT3Q9UH03 358 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 NEUROG3Q9Y4Z2 214 aa12.37□□□□□ -0.43
PTPN7-210ENST00000477625 POM121BA6NF01 834 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 MUSKO15146 869 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 TM7SF2O76062 418 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 DKK1O94907 266 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 LDOC1O95751 146 aaPredicted RBP12.36□□□□□ -0.43
PTPN7-210ENST00000477625 PEX11BO96011 259 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 KRT7P08729 469 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 CD48P09326 243 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 SERPINA4P29622 427 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 MAN1A1P33908 653 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 SERPINB6P35237 376 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 RABIFP47224 123 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 SCNN1BP51168 640 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 ELP6Q0PNE2 266 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 DPYSL3Q14195 570 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 PDK2Q15119 407 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 TMEM52BQ4KMG9 183 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 CFAP58Q5T655 872 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 TMCO4Q5TGY1 634 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 KYAT3Q6YP21 454 aaKnown RBP12.36□□□□□ -0.43
PTPN7-210ENST00000477625 KANSL1Q7Z3B3 1105 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 CPNE8Q86YQ8 564 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 LRRC49Q8IUZ0 686 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 SLC22A18ASQ8N1D0 253 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 EID2Q8N6I1 236 aa12.36□□□□□ -0.43
PTPN7-210ENST00000477625 KCTD6Q8NC69 237 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms